DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment fd102C and Foxd2

DIOPT Version :9

Sequence 1:	NP_651951.1	Gene:	fd102C / 43843	FlyBaseID:	FBgn0039937	Length:	599	Species:	Drosophila melanogaster
Sequence 2:	XP_233422.5	Gene:	Foxd2 / 313504	RGDID:	1304642	Length:	494	Species:	Rattus norvegicus

Alignment Length:	316	Identity:	94/316 - (29%)
Similarity:	118/316 - (37%)	Gaps:	110/316 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly    76 GGTGG------SGASAPWLHLSPYGH---------------HGSGSLPSVN------RMAALSTI 113
            ||:||      ||..|| ..:.|:||               ..||......      |.||.:..
  Rat    32 GGSGGGELTARSGPRAP-RDVLPHGHELPPEEAEADVAEDEEESGGCSDCEPRALGPRGAAAAAG 95

  Fly   114 SLFPQTQRIFQPEEP--------------------KPQHSYIGLIAMAILSSTDMKLVLSDIYQY 158
            |..|..|.......|                    ||.:|||.||.||||.|...:|.||:|.::
  Rat    96 SPGPGVQAARGATGPGPGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEF 160

  Fly   159 ILDNYPYFRSRGPGWRNSIRHNLSLNDCFIKSGRSAN--GKGHYWAIHPANMEDFRKGDFRRRKA 221
            |...:||:|.:.|.|:|||||||||||||:|..|...  |||:||.:.|.:.:.|..|.|.||:.
  Rat   161 ISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRK 225

  Fly   222 QRKVRKHMGLSVDDASTDSPSPPPLDLTTPPPPSSQSALQL----SALGYPYHQHYIGQFFNRSS 282
            :.|              ..|.|||     .|.|.....|.|    :|.|.|      |.|.:..:
  Rat   226 RFK--------------RQPLPPP-----HPHPHPHPELLLRGGAAAAGDP------GAFLSGFA 265

  Fly   283 APGMTHYS-----------PPDPALLMQRQEANNLDQTIQPTQLQQPHSHHQHFAY 327
            |.|...|.           ||.||                    ..||.|...||:
  Rat   266 AYGAYGYGYGLALPAYGAPPPGPA--------------------PHPHPHPHAFAF 301

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
fd102C	NP_651951.1	Forkhead	129..213	CDD:278670	44/85 (52%)
Foxd2	XP_233422.5	FH_FOXD1_D2-like	131..229	CDD:410820	49/111 (44%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1270467at2759
OrthoFinder	1	1.000	-	-		FOG0000010
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.010