DRSC/TRiP Functional Genomics Resources

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Protein Alignment fuss and Skor2

DIOPT Version :10

Sequence 1:NP_001162829.1 Gene:fuss / 43835 FlyBaseID:FBgn0039932 Length:770 Species:Drosophila melanogaster
Sequence 2:XP_038953261.1 Gene:Skor2 / 681200 RGDID:1598071 Length:1008 Species:Rattus norvegicus


Alignment Length:308 Identity:187/308 - (60%)
Similarity:221/308 - (71%) Gaps:19/308 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RSNHVSSVLLYGVQIVSLHIEGQERLCLAQISNTLLKQFSYNEIHNRRVALGITCVQCTPVQLEI 92
            :.|.|..|:|||:.||||.|:||||||||||||||||.|||||||||||||||||||||||||||
  Rat    37 KPNQVGQVILYGIPIVSLVIDGQERLCLAQISNTLLKNFSYNEIHNRRVALGITCVQCTPVQLEI 101

  Fly    93 LRRAGAMPVSSRRCGMITRREAERLCKSFLGDNTPPRLPDDFAFNVQHKCAWGCRGSFLPSRYNS 157
            ||||||||:|||||||||:||||||||||||:|.||:|||:|||:|.|:|||||||||:|:||||
  Rat   102 LRRAGAMPISSRRCGMITKREAERLCKSFLGENRPPKLPDNFAFDVSHECAWGCRGSFIPARYNS 166

  Fly   158 SRAKCIKCSYCGMFFSPNKFIFHSHRITTNDRYVQPDAANFNSWRRHMSLSGNDYDEKIIHAWED 222
            |||||||||||.|:|||||||||||| |.:.:|.|||||||||||||:.|:.....::::.||||
  Rat   167 SRAKCIKCSYCNMYFSPNKFIFHSHR-TPDAKYTQPDAANFNSWRRHLKLTDKSPQDELVFAWED 230

  Fly   223 VKAMFNGGTRKR-LVGSSINPR-SPGSPTQSTAVSSGVGSSSCGS-----------PTSFERDTN 274
            ||||||||:||| |...|.:|. .|.|..::.||::....:..|.           |........
  Rat   231 VKAMFNGGSRKRALPQPSAHPACHPLSSVKAAAVAAAAAVAGGGGLLGPHLLGAPPPPPPPPPLA 295

  Fly   275 EVDG--KSGSSLPQRSQIDSQYNYGTVAAAAAVVGVTA---VAAATVG 317
            |:.|  .:....|:....|.......|.|||::....|   |||||.|
  Rat   296 ELAGAPHAHHKRPRFDDDDDSLQEAAVVAAASLSAAAASLSVAAATGG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fussNP_001162829.1 DHD_Skor 32..122 CDD:410783 79/89 (89%)
c-SKI_SMAD_bind 135..228 CDD:198114 66/92 (72%)
Skor2XP_038953261.1 DHD_Skor 41..131 CDD:410783 79/89 (89%)
c-SKI_SMAD_bind 144..236 CDD:198114 66/92 (72%)

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