DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fuss and SKOR2

DIOPT Version :9

Sequence 1:NP_001162829.1 Gene:fuss / 43835 FlyBaseID:FBgn0039932 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_001264992.1 Gene:SKOR2 / 652991 HGNCID:32695 Length:1015 Species:Homo sapiens


Alignment Length:315 Identity:187/315 - (59%)
Similarity:223/315 - (70%) Gaps:32/315 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RSNHVSSVLLYGVQIVSLHIEGQERLCLAQISNTLLKQFSYNEIHNRRVALGITCVQCTPVQLEI 92
            :.|.|..|:|||:.||||.|:||||||||||||||||.|||||||||||||||||||||||||||
Human    37 KPNQVGQVILYGIPIVSLVIDGQERLCLAQISNTLLKNFSYNEIHNRRVALGITCVQCTPVQLEI 101

  Fly    93 LRRAGAMPVSSRRCGMITRREAERLCKSFLGDNTPPRLPDDFAFNVQHKCAWGCRGSFLPSRYNS 157
            ||||||||:|||||||||:||||||||||||:|.||:|||:|||:|.|:|||||||||:|:||||
Human   102 LRRAGAMPISSRRCGMITKREAERLCKSFLGENRPPKLPDNFAFDVSHECAWGCRGSFIPARYNS 166

  Fly   158 SRAKCIKCSYCGMFFSPNKFIFHSHRITTNDRYVQPDAANFNSWRRHMSLSGNDYDEKIIHAWED 222
            |||||||||||.|:|||||||||||| |.:.:|.|||||||||||||:.|:.....::::.||||
Human   167 SRAKCIKCSYCNMYFSPNKFIFHSHR-TPDAKYTQPDAANFNSWRRHLKLTDKSPQDELVFAWED 230

  Fly   223 VKAMFNGGTRKRLVGSSINPRSPGS-----PTQS---------TAVSSG---VGSSSCGSPTSFE 270
            ||||||||:|||.:     |: ||:     |..|         .||:.|   :|....|:|....
Human   231 VKAMFNGGSRKRAL-----PQ-PGAHPACHPLSSVKAAAVAAAAAVAGGGGLLGPHLLGAPPPPP 289

  Fly   271 RDTNEVDGKSGS-----SLPQRSQIDSQYNYGTVAAAAAVVGVTA---VAAATVG 317
            .....:...:|:     ..|:....|.......|.|||::....|   ||||:.|
Human   290 PPPPPLAELAGAPHAHHKRPRFDDDDDSLQEAAVVAAASLSAAAASLSVAAASGG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fussNP_001162829.1 Ski_Sno 25..123 CDD:280577 81/94 (86%)
c-SKI_SMAD_bind 135..228 CDD:198114 66/92 (72%)
SKOR2NP_001264992.1 Ski_Sno 39..132 CDD:280577 81/92 (88%)
c-SKI_SMAD_bind 145..235 CDD:285935 64/90 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 169 1.000 Domainoid score I3803
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003480
OrthoInspector 1 1.000 - - otm42020
orthoMCL 1 0.900 - - OOG6_106258
Panther 1 1.100 - - LDO PTHR10005
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5040
SonicParanoid 1 1.000 - - X2371
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.990

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