DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fuss and skor1

DIOPT Version :9

Sequence 1:NP_001162829.1 Gene:fuss / 43835 FlyBaseID:FBgn0039932 Length:770 Species:Drosophila melanogaster
Sequence 2:XP_012814921.1 Gene:skor1 / 100491438 XenbaseID:XB-GENE-877133 Length:742 Species:Xenopus tropicalis


Alignment Length:781 Identity:268/781 - (34%)
Similarity:369/781 - (47%) Gaps:176/781 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SVAHFDRMENCQT---SQRSNHVSSVLLYGVQIVSLHIEGQERLCLAQISNTLLKQFSYNEIHNR 74
            |..|....|| ||   |.:.|.|....||||.||||.|:||||||||||||||||.:||||||||
 Frog    16 SKQHQSPQEN-QTFTGSLKPNQVGETCLYGVPIVSLVIDGQERLCLAQISNTLLKSYSYNEIHNR 79

  Fly    75 RVALGITCVQCTPVQLEILRRAGAMPVSSRRCGMITRREAERLCKSFLGDNTPPRLPDDFAFNVQ 139
            ||||||||||||||||||||||||||:|||||||||:||||||||||||::.||:||::|||:|.
 Frog    80 RVALGITCVQCTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGEHRPPKLPENFAFDVA 144

  Fly   140 HKCAWGCRGSFLPSRYNSSRAKCIKCSYCGMFFSPNKFIFHSHRITTNDRYVQPDAANFNSWRRH 204
            |:|||||||||:|:||||||||||||:|||::|||||||||||| |.:.:|.|||||||||||||
 Frog   145 HECAWGCRGSFIPARYNSSRAKCIKCAYCGLYFSPNKFIFHSHR-TPDSKYTQPDAANFNSWRRH 208

  Fly   205 MSLSGNDYDEKIIHAWEDVKAMFNGGTRKRLVGS---------------SINPRSPGSPTQSTAV 254
            :.|:.....:.:.|:|||||||||||||||...|               .:.|..|..|.::...
 Frog   209 LRLNDTTPSDDLSHSWEDVKAMFNGGTRKRAFPSPASSSSSSSSARRHLELAPPPPPPPAKALRG 273

  Fly   255 SSGVGSSSCGSPTSF------ERDTNEVDGKSGSSL-PQRSQIDSQYNY--------------GT 298
            .|....|...:..||      .:..:.|..|.|..| |     ...|.:              |.
 Frog   274 PSAEEESGATAARSFPLIPVPSKGFSGVLHKMGPPLFP-----PPPYGFPAFGLCAKKDDGGLGD 333

  Fly   299 VAAAAAVVGV---TAVAAA-TVGVPFNLH-----GSTVLSPLHSLRNERDLSIMPISRNFVVDYM 354
            ...||.:.||   ||.|:. :|..||.:.     |:..:.|...|..::.:.    .::.||.  
 Frog   334 AGKAAGLPGVFWPTAPASKDSVYPPFPVFWPAAAGALPVPPYTGLTQQQQVP----GKSAVVG-- 392

  Fly   355 WQQKDQHYQQPYARKIPSGDNSDSSLDFDSWVKPDSNNPIPNANSVRTSDN-------------- 405
                     :|...: |||:.::.                |.....|:.|.              
 Frog   393 ---------EPEEAE-PSGETAEE----------------PTREEERSGDEGRQPGEPLTPRKLR 431

  Fly   406 --CSFN--IK-NESHSSIYGIIKNHKLSGVPNSGLNLSDYNIPSIL-NCSAFK-----PVVASTA 459
              .:|.  :| .||.:.:||   :.:|.|...:    :.|:.|.:| :.|:::     |..|...
 Frog   432 YISAFRPVVKAAESLAKLYG---SRELYGAARA----AGYSSPDLLSDTSSYRSASPSPDTADEP 489

  Fly   460 IVST-SLYTRSNESTRTDCNNPAQSTRTTTVLTHN---SISASSHQIVGHKTFSPILGKIHSNPE 520
            .|.. |......||.:.....|..|:..::..:..   |...|...:.|::.::..:..:....:
 Frog   490 EVDVESGRFPEEESAQLGSLGPGASSSISSPGSERREPSPGGSPASVAGYEVYAKQMTDLPHLMK 554

  Fly   521 KNRIVSVFASSSTGNADDNDDDDEVVDIETTEDEGKFTVQHADSPKTQYDAIS--GSDSPSRSPS 583
            .|......:||...|.|.|:.|.|  |..:|.:|       .||.|...|..|  ...||..:..
 Frog   555 GNSSHQGVSSSYLCNLDPNEQDSE--DSHSTAEE-------LDSRKAFQDPRSHLSHTSPLHTDR 610

  Fly   584 TSTNIDVEQDVDVDIITTDTEDQLELSVGRYSTENTSHSLSFFQAEKIQISDLSPNTKTSSGDNE 648
            .      |:|..:|:            .|....|....:::..:.:|:.:..:....|.   :.|
 Frog   611 G------EEDSPIDV------------TGTQFVEKDIENMAKDELQKLLVEQMDLRKKL---ERE 654

  Fly   649 TNTLKDAKGINGNLQILARRKRNKLQKDRCLSKRTVSKCVSDKSLIKGLAANELSSSLQ----IQ 709
            ..:|||      |.|...:|:         |:.|  .:.|....:::....|||....:    ||
 Frog   655 FQSLKD------NFQDQMKRE---------LAYR--EEMVQQLQIVRDTLCNELDQERKARYAIQ 702

  Fly   710 Q 710
            |
 Frog   703 Q 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fussNP_001162829.1 Ski_Sno 25..123 CDD:280577 82/100 (82%)
c-SKI_SMAD_bind 135..228 CDD:198114 65/92 (71%)
skor1XP_012814921.1 Ski_Sno 35..128 CDD:367087 80/92 (87%)
c-SKI_SMAD_bind 140..232 CDD:198114 65/92 (71%)
PRK10263 <341..>500 CDD:236669 36/197 (18%)
PKK 626..720 CDD:372134 19/98 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 169 1.000 Domainoid score I3757
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003480
OrthoInspector 1 1.000 - - otm49250
Panther 1 1.100 - - O PTHR10005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2371
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.010

Return to query results.
Submit another query.