DRSC/TRiP Functional Genomics Resources

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Protein Alignment fuss and skor1

DIOPT Version :10

Sequence 1:NP_001162829.1 Gene:fuss / 43835 FlyBaseID:FBgn0039932 Length:770 Species:Drosophila melanogaster
Sequence 2:XP_012814921.1 Gene:skor1 / 100491438 XenbaseID:XB-GENE-877133 Length:742 Species:Xenopus tropicalis


Alignment Length:781 Identity:268/781 - (34%)
Similarity:369/781 - (47%) Gaps:176/781 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SVAHFDRMENCQT---SQRSNHVSSVLLYGVQIVSLHIEGQERLCLAQISNTLLKQFSYNEIHNR 74
            |..|....|| ||   |.:.|.|....||||.||||.|:||||||||||||||||.:||||||||
 Frog    16 SKQHQSPQEN-QTFTGSLKPNQVGETCLYGVPIVSLVIDGQERLCLAQISNTLLKSYSYNEIHNR 79

  Fly    75 RVALGITCVQCTPVQLEILRRAGAMPVSSRRCGMITRREAERLCKSFLGDNTPPRLPDDFAFNVQ 139
            ||||||||||||||||||||||||||:|||||||||:||||||||||||::.||:||::|||:|.
 Frog    80 RVALGITCVQCTPVQLEILRRAGAMPISSRRCGMITKREAERLCKSFLGEHRPPKLPENFAFDVA 144

  Fly   140 HKCAWGCRGSFLPSRYNSSRAKCIKCSYCGMFFSPNKFIFHSHRITTNDRYVQPDAANFNSWRRH 204
            |:|||||||||:|:||||||||||||:|||::|||||||||||| |.:.:|.|||||||||||||
 Frog   145 HECAWGCRGSFIPARYNSSRAKCIKCAYCGLYFSPNKFIFHSHR-TPDSKYTQPDAANFNSWRRH 208

  Fly   205 MSLSGNDYDEKIIHAWEDVKAMFNGGTRKRLVGS---------------SINPRSPGSPTQSTAV 254
            :.|:.....:.:.|:|||||||||||||||...|               .:.|..|..|.::...
 Frog   209 LRLNDTTPSDDLSHSWEDVKAMFNGGTRKRAFPSPASSSSSSSSARRHLELAPPPPPPPAKALRG 273

  Fly   255 SSGVGSSSCGSPTSF------ERDTNEVDGKSGSSL-PQRSQIDSQYNY--------------GT 298
            .|....|...:..||      .:..:.|..|.|..| |     ...|.:              |.
 Frog   274 PSAEEESGATAARSFPLIPVPSKGFSGVLHKMGPPLFP-----PPPYGFPAFGLCAKKDDGGLGD 333

  Fly   299 VAAAAAVVGV---TAVAAA-TVGVPFNLH-----GSTVLSPLHSLRNERDLSIMPISRNFVVDYM 354
            ...||.:.||   ||.|:. :|..||.:.     |:..:.|...|..::.:.    .::.||.  
 Frog   334 AGKAAGLPGVFWPTAPASKDSVYPPFPVFWPAAAGALPVPPYTGLTQQQQVP----GKSAVVG-- 392

  Fly   355 WQQKDQHYQQPYARKIPSGDNSDSSLDFDSWVKPDSNNPIPNANSVRTSDN-------------- 405
                     :|...: |||:.::.                |.....|:.|.              
 Frog   393 ---------EPEEAE-PSGETAEE----------------PTREEERSGDEGRQPGEPLTPRKLR 431

  Fly   406 --CSFN--IK-NESHSSIYGIIKNHKLSGVPNSGLNLSDYNIPSIL-NCSAFK-----PVVASTA 459
              .:|.  :| .||.:.:||   :.:|.|...:    :.|:.|.:| :.|:::     |..|...
 Frog   432 YISAFRPVVKAAESLAKLYG---SRELYGAARA----AGYSSPDLLSDTSSYRSASPSPDTADEP 489

  Fly   460 IVST-SLYTRSNESTRTDCNNPAQSTRTTTVLTHN---SISASSHQIVGHKTFSPILGKIHSNPE 520
            .|.. |......||.:.....|..|:..::..:..   |...|...:.|::.::..:..:....:
 Frog   490 EVDVESGRFPEEESAQLGSLGPGASSSISSPGSERREPSPGGSPASVAGYEVYAKQMTDLPHLMK 554

  Fly   521 KNRIVSVFASSSTGNADDNDDDDEVVDIETTEDEGKFTVQHADSPKTQYDAIS--GSDSPSRSPS 583
            .|......:||...|.|.|:.|.|  |..:|.:|       .||.|...|..|  ...||..:..
 Frog   555 GNSSHQGVSSSYLCNLDPNEQDSE--DSHSTAEE-------LDSRKAFQDPRSHLSHTSPLHTDR 610

  Fly   584 TSTNIDVEQDVDVDIITTDTEDQLELSVGRYSTENTSHSLSFFQAEKIQISDLSPNTKTSSGDNE 648
            .      |:|..:|:            .|....|....:::..:.:|:.:..:....|.   :.|
 Frog   611 G------EEDSPIDV------------TGTQFVEKDIENMAKDELQKLLVEQMDLRKKL---ERE 654

  Fly   649 TNTLKDAKGINGNLQILARRKRNKLQKDRCLSKRTVSKCVSDKSLIKGLAANELSSSLQ----IQ 709
            ..:|||      |.|...:|:         |:.|  .:.|....:::....|||....:    ||
 Frog   655 FQSLKD------NFQDQMKRE---------LAYR--EEMVQQLQIVRDTLCNELDQERKARYAIQ 702

  Fly   710 Q 710
            |
 Frog   703 Q 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fussNP_001162829.1 DHD_Skor 32..122 CDD:410783 78/89 (88%)
c-SKI_SMAD_bind 135..228 CDD:198114 65/92 (71%)
skor1XP_012814921.1 DHD_Skor 37..127 CDD:410783 78/89 (88%)
c-SKI_SMAD_bind 140..232 CDD:198114 65/92 (71%)
PRK10263 <341..>500 CDD:236669 36/197 (18%)
OmpH 625..>708 CDD:461098 19/99 (19%)

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