DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and ECM5

DIOPT Version :10

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_013901.1 Gene:ECM5 / 855214 SGDID:S000004788 Length:1411 Species:Saccharomyces cerevisiae


Alignment Length:254 Identity:55/254 - (21%)
Similarity:90/254 - (35%) Gaps:79/254 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 DKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGR 307
            |..:|::.:   :|||...:..|. .|     :....:..|:.|.|.......|..|..||:   
Yeast     5 DSVTKISHI---LNEPVNEKVMVQ-NG-----FHESSKIADIELEIQERPSIKQWESPRSAV--- 57

  Fly   308 IP-SAVGYQPTLATDMGSMQERITTTKKG-------SITSVQAIYVPADDLTDPAPATTFAHLDA 364
            || |...:.|.|.|...|         :|       :|.||..:.:|     :..||..|..   
Yeast    58 IPTSNHNFSPFLYTQFKS---------RGAAPFAPETIKSVDLVELP-----EGVPARVFHE--- 105

  Fly   365 TTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKILQD----YKSLQDIIAILG 425
                     :.|::..:.|....:.|:               .:|.|.|    |:.::|:.::.|
Yeast   106 ---------KTGLFYQISPHSIPTFIL---------------AKKELPDPIKFYELVEDLGSVYG 146

  Fly   426 MDELS---EEDKLTVA---------RARKIQRFLSQPFQVAEVFTGHAGKLVPLEQTIK 472
            ..:|.   :.||.|..         :||| |.|.|..||..::...:| ||......||
Yeast   147 CVKLKIIPDADKFTQLNVDVDRLWFKARK-QFFNSNEFQRTKIVDFYA-KLYNFHNKIK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 AtpD 44..510 CDD:439825 55/254 (22%)
ECM5NP_013901.1 BRIGHT 187..280 CDD:128777 5/18 (28%)
cupin_RmlC-like 512..662 CDD:477354
PHD_Ecm5p_Lid2p_like 1240..1287 CDD:276993
Blue background indicates that the domain is not in the aligned region.

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