DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and JHD2

DIOPT Version :10

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_012653.1 Gene:JHD2 / 853583 SGDID:S000003880 Length:728 Species:Saccharomyces cerevisiae


Alignment Length:77 Identity:19/77 - (24%)
Similarity:29/77 - (37%) Gaps:15/77 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 DERGPIDTDKTAA-IHAEAP---------EFVQMSVEQEILVTGIKVVD-----LLAPYAKGGKI 185
            :.|..:.|.|..| ||.|.|         ||:..::..:.|:..:|..|     ...|.|....:
Yeast   336 NRRSSLTTVKYGADIHNELPGQITGFPTREFIPKNINGDELIDYLKYCDHPMNLTNLPMAHNSLL 400

  Fly   186 GLFGGAGVGKTV 197
            .||.....|.|:
Yeast   401 PLFKRNISGMTI 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 AtpD 44..510 CDD:439825 19/77 (25%)
JHD2NP_012653.1 JmjN 3..46 CDD:128818
PHD_BAZ1A_like 237..282 CDD:277019
BAH 260..>320 CDD:470629
JmjC 414..532 CDD:396791
Blue background indicates that the domain is not in the aligned region.

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