DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and PKDM7D

DIOPT Version :10

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_172338.5 Gene:PKDM7D / 837384 AraportID:AT1G08620 Length:1223 Species:Arabidopsis thaliana


Alignment Length:445 Identity:83/445 - (18%)
Similarity:150/445 - (33%) Gaps:110/445 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 DVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV------RGQKVLDTGY 113
            |.::|  :|....::..|..|....||:.    |.....:|::.:..:.      .|..:.||..
plant   831 DDEYD--IPRKRGSVRRDAISSGKKLEIR----ERPTHVLALEASAKIAAPICQREGDSLRDTRN 889

  Fly   114 PIRIPVG-AETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLA 177
            .|.:|.. .:|:.|.:           |..|.. |.::|||....|            .:.:.:|
plant   890 TISLPTNDQKTMRRDV-----------PSSTSH-AEVNAEATGLTQ------------DICNRMA 930

  Fly   178 PYAKGG------KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-------------VGERT 223
            ..:.||      |....||      :.|:::::....:.|..|....             :.:..
plant   931 TNSHGGGKPTSCKSKNSGG------LAIVDVVDGTRSSSGTPSCSQNNSPDRFIRQKGPRIAKVV 989

  Fly   224 REGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFI 288
            |..|.....:..|.|:|.|...|:.|:.      |.|.|:||        :|....:..::..:|
plant   990 RRINCNVEPLSYGCVLSGKSWCSRRAIF------PKGFRSRV--------KYINILDPTNMCFYI 1040

  Fly   289 DNIFRFTQAGSEVSALLGRIPSA--VGYQPTLATDMGSMQERIT--TTK-----KGSITSVQAIY 344
            ..|....:........|...||.  |...||...:|  ::||:.  .||     |..:..:|...
plant  1041 SEILDAGRNSPLFMVYLESNPSEVFVHMSPTRCWEM--VRERVNQEITKQHKAGKSDLPPLQPSG 1103

  Fly   345 VPAD----DLTDPAPATTFAHLDATTV---------LSRAIAELGIYPAVDPLDSTSRIMDPNI- 395
            .|..    ..:.||.......||...|         .||...:....|.:...:::.|....|: 
plant  1104 SPDGFEMFGYSSPAIVQAIEALDVNRVCTDYWDSRPYSRPQVQFPANPLLREANTSGRSNVGNLQ 1168

  Fly   396 IGQEHYNVARGVQKIL---------QDYKSLQDIIAILGMDELSEEDKLTVARAR 441
            :...|:....|:..||         ::..|||::::....|.::|..|..:...|
plant  1169 LNPGHHISPTGINSILKVLFKKASMEELSSLQEVLSETNSDMVTELVKEEIQNRR 1223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 AtpD 44..510 CDD:439825 83/445 (19%)
PKDM7DNP_172338.5 JmjN 161..193 CDD:460542
JmjC 408..524 CDD:396791
zf-C5HC2 631..683 CDD:460750
FYRN 1002..1046 CDD:128814 14/57 (25%)
FYRC 1052..1146 CDD:197781 21/95 (22%)
Blue background indicates that the domain is not in the aligned region.

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