DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and AT5G08680

DIOPT Version :10

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_680155.1 Gene:AT5G08680 / 830769 AraportID:AT5G08680 Length:559 Species:Arabidopsis thaliana


Alignment Length:513 Identity:375/513 - (73%)
Similarity:425/513 - (82%) Gaps:21/513 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LGQLSTAPFSARSHAAKAAKAAAAAN---------------GKIVAVIGAVVDVQFDD--NLPPI 65
            ||::  |.:|..|.|..||.::|.|.               |::..||||:|||:|:|  .||||
plant    48 LGRV--AEYSTSSPANSAAPSSAPAKDEGKKTYDYGGKGAIGRVCQVIGAIVDVRFEDQEGLPPI 110

  Fly    66 LNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINV 130
            :.:|||.:...||||||:.|||:|.|||||||||||||||:|||:||.||.:|||..|||||:||
plant   111 MTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNV 175

  Fly   131 IGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGK 195
            :||||||||.|.|:....||.:||..|.::..||||.||||||||||||.:||||||||||||||
plant   176 LGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGK 240

  Fly   196 TVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISL--KDKTSKVALVYGQMNEP 258
            |||||||||||||||||:|||||||||||||||||.||||.|||.|  |...||.||||||||||
plant   241 TVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEP 305

  Fly   259 PGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 323
            |||||||.||||||||||||.||||||||||||||||||.|||||||||||||||||||||:|:|
plant   306 PGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLG 370

  Fly   324 SMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTS 388
            ::|||||||||||||||||||||||||||||||||||||||||||||.|:|||||||||||||||
plant   371 ALQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTS 435

  Fly   389 RIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQV 453
            |::.|:|:|:||||.||||||:||:||:|||||||||||||||:|||||||||||||||||||.|
plant   436 RMLSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHV 500

  Fly   454 AEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIEEVVEKADRLAKEAA 511
            ||:|||..||.|.|::.|..|..:|.|.||.|.|.:|||||.|:|||.||:::|||:|
plant   501 AEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKIAKESA 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 AtpD 44..510 CDD:439825 363/469 (77%)
AT5G08680NP_680155.1 Synthase_beta 1..50 CDD:463277 1/1 (100%)
AtpD 85..557 CDD:439825 363/471 (77%)

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