DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and KDM5C

DIOPT Version :10

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_004178.2 Gene:KDM5C / 8242 HGNCID:11114 Length:1560 Species:Homo sapiens


Alignment Length:552 Identity:97/552 - (17%)
Similarity:163/552 - (29%) Gaps:222/552 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DNLPPILNALEVDNRS-------PRLVLEV----AQHLGENTVRTIAMDGTE------------- 100
            |.||.:|:.|:|...|       .|:.|||    .:.|.|  :|.:..:..|             
Human   754 DELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEE--LRALESEARERRFPNSELLQQLK 816

  Fly   101 --------------GLVRGQKVLDTGYPIRI--------------------PVGAETLGRIINVI 131
                          |||.||   :.| |.|:                    |.....:|.:..|:
Human   817 NCLSEAEACVSRALGLVSGQ---EAG-PHRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVL 877

  Fly   132 GEPID------------------------ERGPIDTDKTAAIHAEAPEF--VQMSVEQEILVTGI 170
             |.::                        |||       ..:..|.||.  :|..|||...:..:
Human   878 -EQVEAYQAEAREALASLPSSPGLLQSLLERG-------RQLGVEVPEAQQLQRQVEQARWLDEV 934

  Fly   171 KVVDLLAPYAKGGKIG-----LFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLY 230
            |  ..|||.|:.|.:.     |..||.|..:..       |.||.........:.||..|...|.
Human   935 K--RTLAPSARRGTLAVMRGLLVAGASVAPSPA-------VDKAQAELQELLTIAERWEEKAHLC 990

  Fly   231 NEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFT 295
            .|                    .:...||.....:.            :|.:::.:.:.||....
Human   991 LE--------------------ARQKHPPATLEAII------------REAENIPVHLPNIQALK 1023

  Fly   296 QAGSEVSALLGRIPS-----------------AVGYQ-PTLATDMGSMQERITTT---------- 332
            :|.::..|.:..:..                 |||.. |....::..::.::.|.          
Human  1024 EALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKT 1088

  Fly   333 --KKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI 395
              ||.|..::..:..|..|          |..|:|........|||:|.:           |..:
Human  1089 FLKKNSCYTLLEVLCPCAD----------AGSDSTKRSRWMEKELGLYKS-----------DTEL 1132

  Fly   396 IGQEHYNVARGVQKILQDYKSLQDI----IAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEV 456
            :|                 .|.||:    ..|:...|..:::|..:.:.|:...  ::|..:|..
Human  1133 LG-----------------LSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNS--AKPSPLASS 1178

  Fly   457 FTGHA-GKLVPLEQTIKGFSAI---LAGDYDH 484
            .|..: ..:....|.:.|..|:   |..|:.|
Human  1179 STASSTTSICVCGQVLAGAGALQCDLCQDWFH 1210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 AtpD 44..510 CDD:439825 97/552 (18%)
KDM5CNP_004178.2 JmjN 13..54 CDD:128818
ARID_KDM5C_5D 79..170 CDD:350639
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..227
PHD1_KDM5C_5D 326..371 CDD:277077
JmjC 501..617 CDD:396791
zf-C5HC2 707..759 CDD:460750 3/4 (75%)
PLU-1 772..1100 CDD:462475 63/382 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1161..1181 3/21 (14%)
PHD2_KDM5C_5D 1187..1247 CDD:277081 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1316..1371
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1444..1560
Blue background indicates that the domain is not in the aligned region.

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