Protein Alignment ATPsynbeta and Vha68-2

DIOPT Version :10

• Sequence 1: NP_001259081.1
• Gene: ATPsynbeta / 43829
• FlyBaseID: FBgn0010217
• Length: 511
• Species: Drosophila melanogaster
• Sequence 2: NP_652004.2
• Gene: Vha68-2 / 45012
• FlyBaseID: FBgn0263598
• Length: 614
• Species: Drosophila melanogaster
• Alignment Length: 529
• Identity: 125/529 - (23%)
• Similarity: 210/529 - (39%)
• Gaps: 149/529 - (28%)

  Fly    44 GKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQH--LG-----ENTVRTIAM-DGTE 100
            |::.||.|            |::.|..:...:...::.|..:  :|     |..:.||.: :.|.
  Fly    17 GRVFAVSG------------PVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEETS 69

  Fly   101 GLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPID--------------------------ERG 139
            |:..|..||.||.|:.:.:|...:|.|.:.|..|:.                          |..
  Fly    70 GVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDINELTESIYIPKGVNVPSLSRVASWEFN 134

  Fly   140 PIDT---------DKTAAIHAE--------------------APE--------FVQMSVEQEI-- 165
            |::.         |....:|..                    ||.        .::...:.||
  Fly   135 PLNVKVGSHITGGDLYGLVHENTLVKHKMIVNPRAKGTVRYIAPSGNYKVDDVVLETEFDGEITK 199

  Fly   166 ------------------------LVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNV 206
                                    |:||.:|:|.|.|..:||...:.|..|.||||        :
  Fly   200 HTMLQVWPVRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTV--------I 256

  Fly   207 AKAHGGYS-----VFAGVGERTREGNDLYNEM------IEGGVISLKDKTSKVALVYGQMNEPPG 260
            ::|...||     ::.|.|||..|.:::..:.      |:|...|:..:|   |||....|.|..
  Fly   257 SQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKRT---ALVANTSNMPVA 318

  Fly   261 ARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSM 325
            ||.....||:|::|||||. |.:|.:..|:..|:.:|..|:|..|..:|:..||...|...:.|.
  Fly   319 AREASIYTGITLSEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASF 382

  Fly   326 QERITTTK-------KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDP 383
            .||....|       :||::.|.|:..|..|.:||..:.|...:.....|.:.:|:...:|:::.
  Fly   383 YERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINW 447

  Fly   384 LDSTSRIM-------DPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAR 441
            |.|.|:.|       |.|.  .|...:...|::|||:.:.|.:|:.::|...|:|.||:|:..|:
  Fly   448 LISYSKYMRALDDFYDKNF--PEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAK 510

  Fly   442 KIQ-RFLSQ 449
            .:: .||.|
  Fly   511 LLKDDFLQQ 519

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ATPsynbeta	NP_001259081.1	AtpD	44..510	CDD:439825	125/529 (24%)
Vha68-2	NP_652004.2	V-ATPase_V1_A	16..606	CDD:273411	125/529 (24%)