DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and JARID2

DIOPT Version :10

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_011512881.1 Gene:JARID2 / 3720 HGNCID:6196 Length:1309 Species:Homo sapiens


Alignment Length:503 Identity:94/503 - (18%)
Similarity:162/503 - (32%) Gaps:156/503 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SKADKNLLPFLGQLSTAPFSARSH--AAKAAKAAAAANGKIVAVIGAVVDVQFDDNLPPILNALE 70
            :||.:.|:.........|.||.:|  :.|...:.|....:::::.||      ..:..|.:|.|:
Human   413 TKAKRELVKDTKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGA------SKSTGPAVNGLK 471

  Fly    71 VDNR-SPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEP 134
            |..| :|:   ...:.:|...:|. .:...|||...::.|:..:....|                
Human   472 VSGRLNPK---SCTKEVGGRQLRE-GLQLREGLRNSKRRLEEAHQAEKP---------------- 516

  Fly   135 IDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLI 199
               :.|....|.||..||.|              |.|     ||..:    ||..| .|.|.|..
Human   517 ---QSPPKKMKGAAGPAEGP--------------GKK-----APAER----GLLNG-HVKKEVPE 554

  Fly   200 MELINNVAK------------AHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVY 252
            ..|..|..|            |||.....:.....|.:...::.....|     |.:.......:
Human   555 RSLERNRPKRATAGKSTPGRQAHGKADSASCENRSTSQPESVHKPQDSG-----KAEKGGGKAGW 614

  Fly   253 GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIP-------- 309
            ..|:|.|..|...             :|..|.|::|:::    :|..|...:...||        
Human   615 AAMDEIPVLRPSA-------------KEFHDPLIYIESV----RAQVEKFGMCRVIPPPDWRPEC 662

  Fly   310 ---------SAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLT-DPAPATTFAHLDA 364
                     :.:.:...|....|...:|:...||         ::.:..:| |..|......||.
Human   663 KLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKK---------HLKSQGITMDELPLIGGCELDL 718

  Fly   365 TTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIA------- 422
            .... |.|.|:|....|..|...:::.|                 :|:..::.||.:|       
Human   719 ACFF-RLINEMGGMQQVTDLKKWNKLAD-----------------MLRIPRTAQDRLAKLQEAYC 765

  Fly   423 --ILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLE 468
              :|..|.||.|:.      |::::.:....::.|...|      |||
Human   766 QYLLSYDSLSPEEH------RRLEKEVLMEKEILEKRKG------PLE 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 AtpD 44..510 CDD:439825 85/465 (18%)
JARID2XP_011512881.1 JmjN 619..660 CDD:128818 11/57 (19%)
ARID_JARD2 683..794 CDD:350634 26/143 (18%)
JmjC 979..1094 CDD:396791
zf-C5HC2 1202..1255 CDD:460750
Blue background indicates that the domain is not in the aligned region.

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