DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and KDM5B

DIOPT Version :10

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001300971.1 Gene:KDM5B / 10765 HGNCID:18039 Length:1580 Species:Homo sapiens


Alignment Length:476 Identity:97/476 - (20%)
Similarity:167/476 - (35%) Gaps:130/476 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DKNLLPFLGQLSTAPFSARSHAAKAAKAAAAANGKIVAVIGAVVDVQFDDNLPPILNALEVDNRS 75
            |...|..|| :..||:||      ..||.|.....:      .|...:||....:|.|      .
Human   973 DMRRLIDLG-VGLAPYSA------VEKAMARLQELL------TVSEHWDDKAKSLLKA------R 1018

  Fly    76 PRLVL-----------EVAQHLG-----ENTVRTIA--MDGTEGLVRGQK--VLDTGYPI----- 115
            ||..|           |:..:|.     :::|:...  :...|||..|.:  ||||...:     
Human  1019 PRHSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDWLQDVEGLQAGGRVPVLDTLIELVTRGR 1083

  Fly   116 RIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYA 180
            .|||...:|.|:..::.|       :...|..|::....|....|           ::::|.|..
Human  1084 SIPVHLNSLPRLETLVAE-------VQAWKECAVNTFLTENSPYS-----------LLEVLCPRC 1130

  Fly   181 KGGKIGL------------FGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE-RTREGNDLYNE 232
            ..|.:||            .|.....|...:.:|...:.::....|..|.:|| |.||...|.:.
Human  1131 DIGLLGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALTESKETASAMATLGEARLREMEALQSL 1195

  Fly   233 MI--EGGVIS-LKDKTSKVALVYGQMNEPPGA-------------RARVALTGLT------VAEY 275
            .:  ||.::| |:|...|:.|    ..:.|.|             .:.||:..::      :..:
Human  1196 RLANEGKLLSPLQDVDIKICL----CQKAPAAPMIQCELCRDAFHTSCVAVPSISQGLRIWLCPH 1256

  Fly   276 FRDQEG---QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGS-----MQERITT- 331
            .|..|.   :.:|..:.::.|......|..||...|...|.:|......:.|     :|:|:.: 
Human  1257 CRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGSG 1321

  Fly   332 -------TKKGSITSVQAIYVPADDLTDPAP-----ATTFAHLDATTVLSRAIAEL-GIYPAVDP 383
                   ...|.::....:..|....:...|     .|::.|...:|  .|:...| |:.|.|:.
Human  1322 LLYSRWQASAGQVSDTNKVSQPPGTTSFSLPDDWDNRTSYLHSPFST--GRSCIPLHGVSPEVNE 1384

  Fly   384 LDSTSRIMD---PNIIGQEHY 401
            |...::::.   |.|  ||.|
Human  1385 LLMEAQLLQVSLPEI--QELY 1403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 AtpD 44..510 CDD:439825 86/443 (19%)
KDM5BNP_001300971.1 JmjN 31..72 CDD:128818
ARID_KDM5B 94..183 CDD:350638
PHD1_KDM5B 347..392 CDD:277076
JmjC 522..638 CDD:396791
zf-C5HC2 728..780 CDD:460750
PLU-1 793..1124 CDD:462475 40/187 (21%)
PHD2_KDM5B 1214..1257 CDD:277080 5/46 (11%)
PHD3_KDM5B 1522..1571 CDD:277157
Blue background indicates that the domain is not in the aligned region.

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