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Protein Alignment pho and Yy1

DIOPT Version :9

Sequence 1:	NP_524630.1	Gene:	pho / 43819	FlyBaseID:	FBgn0002521	Length:	520	Species:	Drosophila melanogaster
Sequence 2:	NP_033563.2	Gene:	Yy1 / 22632	MGIID:	99150	Length:	414	Species:	Mus musculus

Alignment Length:	344	Identity:	149/344 - (43%)
Similarity:	167/344 - (48%)	Gaps:	146/344 - (42%)

- Green bases have known domain annotations that are detailed below.

  Fly   145 SRRWEQKLVHIKTMEGEFSVTMWASGIS---DDEYSGSDQIVGA------SDLLKGKE-----EF 195
            :::||||.|.|||:|||||||||:|...   |.|....:||:|.      |:.:.||:     ..
Mouse   202 NKKWEQKQVQIKTLEGEFSVTMWSSDEKKDIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIP 266

  Fly   196 GIDGFTSQQNKEYQKMESKFTNAQTLEMPHPISSVQIMDHLIKERGNLSQENNISERILSKTTLS 260
            |||....:|..|:.:|:.:                     .|||
Mouse   267 GIDLSDPKQLAEFARMKPR---------------------KIKE--------------------- 289

  Fly   261 FEEPILLPDSSSIELVNETAAMTINNHRTLSNHTGNTGDLHALPSSVPFRIGLHEGQVNDCLSTI 325

Mouse   290 ----------------------------------------------------------------- 289

  Fly   326 SQSTHQDNTDSTGCGEMNLSEVTVSYTNDKKIACPHKGCNKHFRDSSAMRKHLHTHGPRVHVCAE 390
                  |:...|                   ||||||||.|.|||:|||||||||||||||||||
Mouse   290 ------DDAPRT-------------------IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAE 329

  Fly   391 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPFVCPFDACNKKF 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||.|||||
Mouse   330 CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF 394

  Fly   456 AQSTNLKSHILTHAKAKRN 474
            |||||||||||||||||.|
Mouse   395 AQSTNLKSHILTHAKAKNN 413

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.