DRSC/TRiP Functional Genomics Resources

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Protein Alignment ey and Poxm

DIOPT Version :10

Sequence 1:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster
Sequence 2:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster


Alignment Length:392 Identity:138/392 - (35%)
Similarity:177/392 - (45%) Gaps:113/392 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DDEC--HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYET 156
            :.:|  :..|||||||||.|||||::||.:|||||..|.|||||||.|:||:|||||||.||:||
  Fly     4 ESQCPQYGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHET 68

  Fly   157 GSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLR 221
            |||.|.|||||||||.|.:||:.|.:.|:..|.|||||||||||.|.:|...|:||||||:|:||
  Fly    69 GSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILR 133

  Fly   222 N-LAAQKEQQSTGS--GSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNS 283
            | |.:...|.:.|:  ||.|:|.|.|:|                                     
  Fly   134 NKLGSLGHQHTPGTVMGSGSSSGGGSVS------------------------------------- 161

  Fly   284 SESGGASNSGEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGN 348
              |.|..|:|..:...        :|..:...||      ..|   ..|:|           |.:
  Fly   162 --SNGGQNNGTSASNN--------INLSNLGNPG------GGP---HHPHH-----------HHH 196

  Fly   349 HQ----ALQQHQQQSWPPRH---YSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPND 406
            ||    |...|...:....|   |:..:.|.|             :..|| |..:...|.|||..
  Fly   197 HQSAAAAASAHHVHAHAHAHAHLYNSIYQPYS-------------AAAAY-SMKTPCGSPSPPQG 247

  Fly   407 IESLASIGHQ---RNCPVATEDIH------LKKELDGHQ------SDETGSGEGENSNGGASNIG 456
            .....|:.|.   |:...|....|      :...|..||      |.:.|.|.     ||...:|
  Fly   248 AGGQGSVPHPHQLRSVAAAAAAAHWPSSHSVSDILAHHQAVALRASCQVGVGV-----GGMGGMG 307

  Fly   457 NT 458
            :|
  Fly   308 ST 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eyNP_001014693.1 PAX 98..221 CDD:128645 83/122 (68%)
Homeodomain 473..528 CDD:459649
PoxmNP_001036687.1 PAX 10..133 CDD:128645 83/122 (68%)
Blue background indicates that the domain is not in the aligned region.

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