Protein Alignment CG11360 and Mex3c

DIOPT Version :10

• Sequence 1: NP_651934.2
• Gene: CG11360 / 43810
• FlyBaseID: FBgn0039920
• Length: 628
• Species: Drosophila melanogaster
• Sequence 2: NP_001100847.1
• Gene: Mex3c / 307271
• RGDID: 1309023
• Length: 464
• Species: Rattus norvegicus
• Alignment Length: 569
• Identity: 219/569 - (38%)
• Similarity: 277/569 - (48%)
• Gaps: 175/569 - (30%)

  Fly   108 AGAVSSEDRS---KKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFV 169
            |.|::.|..:   :||.|.|||||||||||||||||||||||||||||||||||||||||||:||
  Rat    19 AAALNGEQAALLRRKSVNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFV 83

  Fly   170 VTGRKEDVNKAKREILSAADHFSLIRASRKPVSDSQNNGMVGSTTSSGGGAVPRMSGPPCMPGQV 234
            ||||||||..|||||||||:|||:|||||                :..|.|:..:|..|.:|||.
  Rat    84 VTGRKEDVAMAKREILSAAEHFSMIRASR----------------NKNGPALGGLSCSPNLPGQT 132

  Fly   235 TIQVRVPYRVVGLVVGPKGATIKHIQQETQTYIVTPSREKEPIFEVTGLPDNVDTARKQIEAHIA 299
            |:|||||||||||||||||||||.|||:|.||||||||:|||:|||||:|:|||.||::||.|||
  Rat   133 TVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEMHIA 197

  Fly   300 LRTGSGSGSGDAITMQSSDSVDTKEYASLPSLTQILNDDLNSEILSSIYKNSVPSTQEYANNSMK 364
            :|||:                    |.           :||.|                  |..
  Rat   198 MRTGN--------------------YI-----------ELNEE------------------NDF- 212

  Fly   365 TVVNVSNSVKLVQGHHTGN--CFQKSEFAEMEMTANITAADILDKRLPGNEVSVPLAKANVANIV 427
                          |:.|.  .|:........:::|                .||.::|.:.: .
  Rat   213 --------------HYNGTDVSFEGGTLGSAWLSSN----------------PVPPSRARMMS-N 246

  Fly   428 FRTTSSKTLSFCPPTSTSASFHSNCNANILTRSCSSASSTTSTKSTNN--SANTPPEILNIWKSI 490
            :|..||.:|.   ..||.:.|.||..|:.         |.||..||.|  ..:|.|.:      .
  Rat   247 YRNDSSSSLG---SGSTDSYFGSNRLADF---------SPTSPFSTGNFWFGDTLPSV------G 293

  Fly   491 SDSIDVDEGIGDSPSIWNQPANIIPTAHCSPTISISPTDSLLGMG-EHSANQQNLNHAKEP---- 550
            |:.:.||....||          :||:..:......|.:.|.|.| :.|.|.:......:|
  Rat   294 SEDLAVDSPAFDS----------LPTSAQTIWTPFEPVNPLSGFGSDPSGNMKTQRRGSQPSTPR 348

  Fly   551 IMPNLPQKIK------------------GIQVQ----SNADNFLT----------------HREC 577
            :.|..|:.|:                  |:.:.    ||..|..:                ..:|
  Rat   349 LSPTFPESIEHPLARRVRSDPPSTGNHVGLPIYIPAFSNGTNSYSSSNGGSTSSSPPESRRKHDC 413

  Fly   578 FVCNENTVTTALVPCGHNMFCMECANHICLSMDAVCPVCNSIVYHAMRI 626
            .:|.||.|..||||||||:|||||||.||......||||.:.|..|::|
  Rat   414 VICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQI 462

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11360	NP_651934.2	KH-I_MEX3_rpt1	123..195	CDD:411851	65/71 (92%)
		KH-I_MEX3_rpt2	231..302	CDD:411852	56/70 (80%)
		PEX10	<515..621	CDD:227861	42/148 (28%)
		RING-HC_MEX3	575..627	CDD:438181	29/52 (56%)
Mex3c	NP_001100847.1	KH-I_MEX3_rpt1	37..109	CDD:411851	65/71 (92%)
		KH-I_MEX3_rpt2	129..200	CDD:411852	56/70 (80%)
		RING-HC_MEX3C	410..464	CDD:438382	29/53 (55%)