DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ekar and Ir76b

DIOPT Version :10

Sequence 1:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster
Sequence 2:XP_061511889.1 Gene:Ir76b / 1280702 VectorBaseID:AGAMI1_009346 Length:658 Species:Anopheles gambiae


Alignment Length:476 Identity:116/476 - (24%)
Similarity:191/476 - (40%) Gaps:83/476 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 TLVVITILETPYVMMHYGKNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGE 468
            ||.|.|:.:.|   :.|.....|.....|...::||.:..:..|.|.|.:......|:    :.:
Mosquito   113 TLRVTTLQDWP---LSYTVKINGTYIGAGVAFELLEFLMEKFNFTYELVMPEQNIVGS----SND 170

  Fly   469 WNGMVAQLM-KYKADLAVGSMTI-TYARESVIDFTKPFMNLGISILFKVPTSEPTRLFSFMNPLA 531
            ..|.|.||: ...||:||..:.| ..||:.:...|.  ::.|..|:..|...|.......:.|..
Mosquito   171 MAGSVLQLLTNGTADMAVSFLPILADARQHIRYSTG--LDEGEWIMIMVRPMESASGSGLLAPFN 233

  Fly   532 IEIWIYVLIAYFLVSLCIY----IVGKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQ 592
            .::||.:|::...|...||    :..:|:.         |.|.|.    ::|....||..|..|:
Mosquito   234 RDVWILILVSLLAVGPIIYGLLILRHRLTK---------DKEQII----YTLPHCVWFVYGALMK 285

  Fly   593 QSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQTEISYGTLD 657
            |...:.|...||||:.::|..|..|:.:.|||||.||||..:...||.||||: .:.|..:.|:.
Mosquito   286 QGSTLSPTGDSTRILFASWWIFITILTSFYTANLTAFLTLSKFTLPINNAEDV-RRKEKQFVTIR 349

  Fly   658 SGSTMTFF--RDSVIETYKKIWRSMDNKKPSAFTTTYEDG---IKRVNQGNYAFLMESTML---- 713
            .|:.....  ||..:....    .:.:|:...|||...|.   ..:|.:.||.|:.:...:    
Mosquito   350 GGAIEYAIKNRDEALNALS----VLVDKRLVDFTTNVNDSDTLADKVAKQNYVFVRDRPAIDHMI 410

  Fly   714 --DYIVQRDCNLTQIGGLLDTKG------YGIAT------------PKGSPWRDKISLAILELQE 758
              ||:|:|..|         .|.      |..||            |..:.|.......:|::.|
Mosquito   411 YADYLVRRKIN---------PKNERVHCPYATATTPFLKRNRAFGYPPNTEWNRIFDPELLKMVE 466

  Fly   759 RGDIQ-MLYDKWWKNTDETCTRK--NTSKQSKANSLGLESIGGVFVVLIAGIIVAAVVAFFEFWY 820
            .|.:: .|:|:..|  .|.|.:.  .|.:|.|...|.:     .:.|::.|.:.:.||  |....
Mosquito   467 GGIVKYKLHDRLPK--AEICPQNLGGTERQLKNRDLVM-----TYFVMVTGFVTSIVV--FASEL 522

  Fly   821 NFRYNYEATPSQSVVNNKYNQ 841
            .|||..:...::.:...:..|
Mosquito   523 GFRYLNQRKLNEQLAQQQQQQ 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..390 CDD:380605
PBP2_iGluR_Kainate 402..771 CDD:270432 100/402 (25%)
Lig_chan 532..806 CDD:459656 77/309 (25%)
Ir76bXP_061511889.1 None
Blue background indicates that the domain is not in the aligned region.

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