DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34116 and CG11560

DIOPT Version :10

Sequence 1:NP_001036616.1 Gene:CG34116 / 4379912 FlyBaseID:FBgn0083952 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_001303392.1 Gene:CG11560 / 39376 FlyBaseID:FBgn0036249 Length:307 Species:Drosophila melanogaster


Alignment Length:287 Identity:79/287 - (27%)
Similarity:122/287 - (42%) Gaps:99/287 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DIHEKIETGVYQLAVNDKSTRSTVWRVYRKIKKDDGSFLEHVLFCIGCRSIMSFTHKSTTNLRRH 71
            ||..||.:|.|:|.  .|:.||:||.|||:|.:.||:.|:...||:||:.:|..|..:|:|||.|
  Fly    27 DILMKINSGEYRLV--KKNKRSSVWNVYREIARPDGTKLKWRYFCMGCKRVMQSTGGTTSNLRIH 89

  Fly    72 RCHLQYLKKQAFCCYNSKGESND------------RKEET------------------------- 99
            :||::|:|:.......|....:|            :|.:|                         
  Fly    90 KCHVRYIKQNGHLTDGSHSYDHDPAPPASQPSPRVQKPKTRRPTSYSTQCEQFYEVTMDPETQYS 154

  Fly   100 --DQEHHEEHDDQQSM-----------------------SDELETKP-SPADVAAFV-------- 130
              |.|.....:::|::                       .:.|.|:| .|.|....|        
  Fly   155 DLDDEIEASLEEEQTIILQLKSKRELESSHSRPLLKLFSEENLSTEPEEPEDEIEIVEAEDQVPI 219

  Fly   131 ---------------GEAVSGGDSTAASARIPDIPEIALPLDASGVEESNVYAQTWSLEYRKLSE 180
                           |||:.           |...|.....||:.:.|:..||:.|:..:.:|:|
  Fly   220 ELDLCDIQHTTSDAGGEAIE-----------PKPTESVAQFDANAISEAESYAKAWAHAFLRLNE 273

  Fly   181 DQKFYAKKAIDEIFVLGRLRRLTLNTV 207
            |||||||::|||:.|||||.||:::||
  Fly   274 DQKFYAKRSIDELLVLGRLERLSISTV 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34116NP_001036616.1 ZnF_BED 29..74 CDD:214746 20/44 (45%)
CG11560NP_001303392.1 None

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