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Protein Alignment CG34116 and ssp
DIOPT Version :10
| Sequence 1: | NP_001036616.1 |
Gene: | CG34116 / 4379912 |
FlyBaseID: | FBgn0083952 |
Length: | 211 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_648546.1 |
Gene: | ssp / 39375 |
FlyBaseID: | FBgn0036248 |
Length: | 368 |
Species: | Drosophila melanogaster |
| Alignment Length: | 123 |
Identity: | 41/123 - (33%) |
| Similarity: | 62/123 - (50%) |
Gaps: | 26/123 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 KFDD---IHEKIETGVYQLAVNDKSTRSTVWRVYRKIKKDDGSFLEHVLFCIGCRSIM-SFTHKS 64
||:. |..|:..|.|:|. .:..|.:||:|||:|.:.||:.:..:.||.||:.:| || :
Fly 12 KFESNQVISAKVLRGEYRLL--RRKQRGSVWKVYREIVRTDGAIINGLYFCTGCKRVMRSF---N 71
Fly 65 TTNLRRHRCHLQYLKKQAFCCYNSKGESNDRKEETDQEHHEEHDDQQSMSDELETKPS 122
|:|||.|:||:.||:.:..| ||...|.| ...:.|.||.:.|
Fly 72 TSNLRTHKCHVDYLRTEELC------------EEGIAEIH-----PPKLDDSLERRLS 112
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG34116 | NP_001036616.1 |
ZnF_BED |
29..74 |
CDD:214746 |
20/45 (44%) |
| ssp | NP_648546.1 |
Myb_DNA-bind_4 |
121..198 |
CDD:463994 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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