DRSC/TRiP Functional Genomics Resources

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Protein Alignment: BG642163 and col-41

Sequence 1:NP_001036331.1 Gene:BG642163 FlyBaseID:FBgn0083938 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_510522.1 Gene:col-41 WormBaseID:WBGene00000618 Length:428 Species:Caenorhabditis elegans

Alignment Length:315 Identity:95/316 (30%)
Similarity:126/316 (40%) Gaps:55/316 (17%)


  Fly   132 SHQYPG--LFAPPSFAQFPGLLGSTGSGPSGIPNLPGTNASPGW-SSPGSSIPSYQLPGIQQQPG 193
            :|..||  :..|...|..||..|.  |||.|.|.|.|.:...|. .:||..    ..||.|.:.|
 Worm   129 THDIPGGCIKCPEGPAGPPGPDGD--SGPEGFPGLQGQSGPSGEDGAPGQE----GAPGDQGEQG 187

  Fly   194 SSPVEYPHAPIKPPSSA--PAGWSSPGSP--IPPPSLPGLPGTPDQNPWGSADRPAHPPASPIQP 254
            ....:....|...|.:.  |.....||.|  :..|.|||..|.|.:      |....|..:|..|
 Worm   188 PKGYDGTDGPDGQPGTTYFPGQAGQPGEPGWLGEPGLPGQHGEPGK------DGEEGPQGAPGTP 246

  Fly   255 GWSPPGSSFPPSP-QSGPPGPP----NWNQLESANRPVYPP----EMPIPPVWNSRRSSNPSAQL 310
            | :....:||.:| |:|.||.|    |:...........||    ..|.||...|  ::.|..:.
 Worm   247 G-NAGHDAFPGTPGQAGKPGAPGKDANYCPCPQRQDDRTPPSSGTSAPQPPPRGS--TAAPGTRA 308

  Fly   311 PPLQEAPLGSLGP---SQLPPGL--PAPPSWSSLESSNPLVQRPELMAPPSLSPSGSSNSVLQPL 370
            ||...||..:..|   ::.||..  |||       :|.|.|:.||  .|.|..||.:......|.
 Worm   309 PPATRAPPATRAPPATTRAPPATTRPAP-------ASQPPVREPE--TPDSGYPSPAPQEPAHPS 364

  Fly   371 PA--KPNWRSSGSPN----SPLYP-PGLPAPPSESI-PDISPNQKT--RSAGSPP 415
            |:  .|::.|...|:    ||.|| |..||.|:.|: |...|.|.:  ..|.|||
 Worm   365 PSYPSPSYPSPSYPSPSYPSPSYPSPSYPAEPAYSVPPPAKPEQPSGGYDAPSPP 419

Known Domains:


GeneSequenceDomainRegion External IDIdentity
BG642163NP_001036331.1 PHA03247 <118..415 CDD:223021 94/314 (30%)
col-41NP_510522.1 Col_cuticle_N 3..55 CDD:198156
Collagen 160..217 CDD:189968 15/61 (25%)
Collagen 208..267 CDD:189968 21/66 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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