DRSC/TRiP Functional Genomics Resources

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Protein Alignment RunxA and runx1

DIOPT Version :10

Sequence 1:NP_001259747.1 Gene:RunxA / 4379817 FlyBaseID:FBgn0083981 Length:663 Species:Drosophila melanogaster
Sequence 2:XP_073804988.1 Gene:runx1 / 58126 ZFINID:ZDB-GENE-000605-1 Length:514 Species:Danio rerio


Alignment Length:463 Identity:176/463 - (38%)
Similarity:224/463 - (48%) Gaps:115/463 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LAERTLGDFLTEHPGELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGND 147
            :|:|::.:.|::|||||:||.||.|:|:|||.|||.|||||:|||||:||||.|||:|||.||||
Zfish   114 MADRSMVEVLSDHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTVMAGND 178

  Fly   148 ENYCAELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTNPPHIATYNKAIKVTVDGPRE 212
            |||.|||||.||.:|||||:||||||||||||||||||||||.||||.:|||.:|||:|||||||
Zfish   179 ENYSAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDGPRE 243

  Fly   213 PRSKTML--------SLLGQQQQFHFAFGQRPFHF---STDPLSGFRMPPIG---------NCQS 257
            ||.....        :|...:|....|....|.|.   :|.|.  ...||.|         :.|.
Zfish   244 PRRHRQKPDEAVKPGALAFSEQLRRSAMRCSPHHGPAPNTRPT--LNTPPFGSPAHSQIPDSRQM 306

  Fly   258 ASNTHWGYGSAASAYSPYLA--SSGLSSCTTPTSAQFNNPALGFTCSSNDQSNNQDFGGATNRDC 320
            .::..|.|   ..:| |||.  |:.....|||.|.  |..||  .|.......:...|...:...
Zfish   307 QTSPSWSY---EQSY-PYLGPISTPAVHPTTPISP--NRTAL--HCPELTAFTDPRVGLERSFPS 363

  Fly   321 VPMLPDSTASDLDQHLSSLVGSTSGQMTHHSLLGAGGQTSISSTVNGASG-GGSAGAGTAGGGAG 384
            :|.|||...||      ..|...:|..|:           ..:.|..|.| |.||.:..||    
Zfish   364 LPSLPDGRFSD------PRVPYPTGAFTY-----------TPTPVTSAIGIGMSAMSSPAG---- 407

  Fly   385 SGGGAGGGAGGNSILVPRYHTNASNEYNVHSSQ---------NGPRSLSDSSQAESPVQEDLLTT 440
                             ||||.....|...|||         :.|..|..||.|.| .|..::.:
Zfish   408 -----------------RYHTYLPPAYPAGSSQAQAGAFQASSSPYHLYYSSAAGS-YQFSMMPS 454

  Fly   441 NTPNLGSTAGGGAANGGAG-------SNAGSGAAGSGAGGAGGASSAVGNPAMLGANQNFPGIVN 498
                      ||||.|...       :||.:|             ||:.:|::  .||: .|:|.
Zfish   455 ----------GGAAAGERSPPRILPCTNASTG-------------SALLHPSL--PNQS-EGVVE 493

  Fly   499 -QAQHSAA 505
             :..||::
Zfish   494 AEGSHSSS 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RunxANP_001259747.1 Runt 88..216 CDD:459963 98/127 (77%)
runx1XP_073804988.1 None

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