DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RunxA and Runx2

DIOPT Version :9

Sequence 1:NP_001259747.1 Gene:RunxA / 4379817 FlyBaseID:FBgn0083981 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001139510.1 Gene:Runx2 / 12393 MGIID:99829 Length:528 Species:Mus musculus


Alignment Length:589 Identity:195/589 - (33%)
Similarity:243/589 - (41%) Gaps:190/589 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 RTLGDFLTEHPGELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGNDENY 150
            ||:.:.:.:||.||:||.||.|:|:|||.|||.|||||||||||:||::.|||:|||.|||||||
Mouse   107 RTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENY 171

  Fly   151 CAELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTNPPHIATYNKAIKVTVDGPREPR- 214
            .|||||.:||||||||:||||||||||||||||||||||.||||.:|||::||||||||||||| 
Mouse   172 SAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRR 236

  Fly   215 -------SKTMLSLLGQQQQFHFAFGQRPFHFSTDPLSGFR--MPPIGNCQSASNTHWGYGSAAS 270
                   ||..|            |..|.......|....|  :||       .|......||.|
Mouse   237 HRQKLDDSKPSL------------FSDRLSDLGRIPHPSMRVGVPP-------QNPRPSLNSAPS 282

  Fly   271 AYSPYLASSGLSSCTTPTSAQFNNPALGFTCSSNDQSNNQDFGGATNRDCVPMLPDSTASDLDQH 335
            .::|    .|.|..|.|..||.:.|      .|.||                    |..|.|.|.
Mouse   283 PFNP----QGQSQITDPRQAQSSPP------WSYDQ--------------------SYPSYLSQM 317

  Fly   336 LSSLVGSTSGQMTHHSLLGAGGQTSISSTVNGASGGGSAGAGTAGGGAGSGGGAGGGAGGNSIL- 399
            .|..:.||               |.:|||                          .|.|..:|. 
Mouse   318 TSPSIHST---------------TPLSST--------------------------RGTGLPAITD 341

  Fly   400 VPRYHTN---ASNEYNVHSSQNGPRSLSDSSQAESPVQEDLLTTNTPNLGSTAGGGAANGGAGSN 461
            |||..::   |::::.:     .|.|||..|||                      ||:..|..|:
Mouse   342 VPRRISDDDTATSDFCL-----WPSSLSKKSQA----------------------GASELGPFSD 379

  Fly   462 AGSGAAGSGAGGAGGASSAVGNPAMLGANQNFPGIVNQAQHSAASAYGGGTGVVGGGHGSAAAAA 526
            .....:.|..     ..|...||.|     ::|         |...|   |..|..|.....:|.
Mouse   380 PRQFPSISSL-----TESRFSNPRM-----HYP---------ATFTY---TPPVTSGMSLGMSAT 422

  Fly   527 AGCNGSLYPVLPASLLYSQLYTAANQSAHG-FHSHTLPAHASPNSSVHGELQSVMDHISNVGVRQ 590
            ...:..|.|..|.|          :||..| |.:.:.|......||...:..             
Mouse   423 THYHTYLPPPYPGS----------SQSQSGPFQTSSTPYLYYGTSSASYQFP------------- 464

  Fly   591 QHNIMAGGGVTHPGDL----TLIGNCGASVRNIEDGNSNRQVAALAAHRGHHNPTDNGG----SV 647
                |..||...|..:    |...| |:::.|....|.|..|.|..:|.......::.|    ||
Mouse   465 ----MVPGGDRSPSRMVPPCTTTSN-GSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESV 524

  Fly   648 WRPY 651
            ||||
Mouse   525 WRPY 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RunxANP_001259747.1 Runt 95..216 CDD:279225 97/128 (76%)
Runx2NP_001139510.1 Runt 116..237 CDD:279225 97/120 (81%)
RunxI 437..528 CDD:285676 25/108 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 212 1.000 Domainoid score I2765
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 1 1.000 - - mtm8706
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.960

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