DRSC/TRiP Functional Genomics Resources

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Protein Alignment zfh2 and abd-A

DIOPT Version :10

Sequence 1:NP_524623.2 Gene:zfh2 / 43795 FlyBaseID:FBgn0004607 Length:3005 Species:Drosophila melanogaster
Sequence 2:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster


Alignment Length:730 Identity:150/730 - (20%)
Similarity:213/730 - (29%) Gaps:265/730 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 SDQHTS----SSKMAAPSAYIPLSSPKVAGKLTVKFGSLN--SATAKTNNLSKVSSTSSPPSTYA 315
            |..|.:    :|..||.:|.:..::...:..::....|.|  |.|...:|.|..:::||.||:.:
  Fly    21 SSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSNTIAGSNTSNTNNSSSSPSSSS 85

  Fly   316 --------SGEVLSPSTDNISNHKSTHCNQETEPPSSSSSEVEMKIGSMSTSPQTNDSDVPCSGF 372
                    ||..||||      |.|.|..|....|.||||..:..      .||.....:   ..
  Fly    86 NNNSNLNLSGGSLSPS------HLSQHLGQSPHSPVSSSSPFQQH------HPQVQQQHL---NH 135

  Fly   373 LQMQHMTTGGAYTPQVSSFH--ASL-AALAANESNDNRVKLITEFLQQQLQQHQSSLFPSPCPDH 434
            .|.||:     :..|....|  :|| |||...:...:..||....:......||..|...|...:
  Fly   136 QQQQHL-----HHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAGN 195

  Fly   435 PDLNGVDCKTCELLDIQQRSKSPSSSHHQFSQSLPQLQIQSQPQQTPHRSPCSNSVALPVSPSAS 499
            .......|           |.|||:|.   |.||             |||...||   |.|.|||
  Fly   196 SQAGDSSC-----------SPSPSASG---SSSL-------------HRSLNDNS---PGSASAS 230

  Fly   500 SVASVGN---------ASTATSSFTIGACSEHINGRPQGVDCARCEMLLNSARLNSGVQMSTRNS 555
            :.||..:         |:.|:|||.|                                       
  Fly   231 ASASAASSVAAAAAAAAAAASSSFAI--------------------------------------- 256

  Fly   556 CKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPRLARGESYSCGYKPYRCEICN 620
             .|.|.      |.|.                        ..||....|.|...|:.....:.|:
  Fly   257 -PTSKM------YPYV------------------------SNHPSSHGGLSGMAGFTGLEDKSCS 290

  Fly   621 YSTTTKGN----LSIHMQSDKHLNNM-QELNSSQNMVAAAAAAAVTGKLLLSSSSPQVTAACPSN 680
            ..|.|..|    :|:...:....... |...::.:.|:||:|.|:....|.::.:...:...|..
  Fly   291 RYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGA 355

  Fly   681 SGSGA------------------GSGSSNIVGGTASLSGNATPSVTGANSSNANAGSNT------ 721
            .|:|.                  ||....:|.|          ...|.|......|..|      
  Fly   356 GGAGGAGIADLPRYPWMTLTDWMGSPFERVVCG----------DFNGPNGCPRRRGRQTYTRFQT 410

  Fly   722 ---------NNAGTKPKPSFRCDI----CSYDTSVA---RNLRIHMTSE---------------- 754
                     |:..|:.:   |.:|    |..:..:.   :|.|:.:..|                
  Fly   411 LELEKEFHFNHYLTRRR---RIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDRE 472

  Fly   755 -----KHTHNMAVLQNNIKHIQAFNFLQQQQQSGTGNIASHSSGSFMPEVALADLAYNQALMIQL 814
                 |....|...|.| |.:|.....|||||.                                
  Fly   473 EQEKMKAQETMKSAQQN-KQVQQQQQQQQQQQQ-------------------------------- 504

  Fly   815 LHQQQQHQQSANTKLSPSSSPVSTPDQFSFS---PKPIKLNHGTGAAM---GIGMAMGMGMSHSN 873
             .|||||||.........|.....|.....|   ...:||..|.|..:   |||..:|.|:..:.
  Fly   505 -QQQQQHQQQQQQPQDHHSIIAHNPGHLHHSVVGQNDLKLGLGMGVGVGVGGIGPGIGGGLGGNL 568

  Fly   874 EVSCELSGDPHPLTK 888
            .:...|....|.|.|
  Fly   569 GMMSALDKSNHDLLK 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zfh2NP_524623.2 C2H2 Zn finger 561..581 CDD:275368 2/19 (11%)
C2H2 Zn finger 616..633 CDD:275368 5/20 (25%)
C2H2 Zn finger 1515..1542 CDD:275371
C2H2 Zn finger 1543..1564 CDD:275371
Homeodomain 1798..1857 CDD:459649
Homeodomain 2155..2211 CDD:459649
Homeodomain 2761..2817 CDD:459649
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 9/58 (16%)
Abdominal-A 456..478 CDD:403567 1/21 (5%)
Blue background indicates that the domain is not in the aligned region.

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