DRSC/TRiP Functional Genomics Resources

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Protein Alignment zfh2 and Ubx

DIOPT Version :10

Sequence 1:NP_524623.2 Gene:zfh2 / 43795 FlyBaseID:FBgn0004607 Length:3005 Species:Drosophila melanogaster
Sequence 2:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster


Alignment Length:408 Identity:99/408 - (24%)
Similarity:128/408 - (31%) Gaps:126/408 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   650 NMVAAAAAAAVTGKLLLSSSSP-----------------QVTAACPSNSGSGAG----------- 686
            :..|:|||||..|..|....||                 .:||||....|.|||           
  Fly    30 DQTASAAAAAYRGFPLSLGMSPYANHHLQRTTQDSPYDASITAACNKIYGDGAGAYKQDCLNIKA 94

  Fly   687 -----------SGSSNIVGGTASLSGNATPSVTG----ANSSN-ANAGSNTNNAGTKP-KPSFRC 734
                       :|.||..||.....|......||    ||..| |||....|.||..| :||   
  Fly    95 DAVNGYKDIWNTGGSNGGGGGGGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPS--- 156

  Fly   735 DICSYDTSVARNLRIHMTSEKHTHNMAVLQNNIKHIQAFNFLQQQQQSGTGNIASHSSGSFMPEV 799
             .|:.|:.|...|.....|.. :|.......|:           ....|.||.....||   ..|
  Fly   157 -ACTPDSRVGGYLDTSGGSPV-SHRGGSAGGNV-----------SVSGGNGNAGGVQSG---VGV 205

  Fly   800 ALADLAYNQALMI-----QLLHQQQQHQQSANTKLSPSSSPVSTPDQFSFSPKPIKLNHGTGAAM 859
            |.|..|:|....|     |.......||.|.:|.....:.....|:    .|...|:........
  Fly   206 AGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPE----DPTKSKIRSDLTQYG 266

  Fly   860 GIGMAMGMGMSHSNEVSCELSGDPHPLTKTDKWPMAFYSCLVCDCYSTNNLDDLNQHLLLDRSRQ 924
            ||...||...|.|      |:|.                 |:.|...||.        |..|.||
  Fly   267 GISTDMGKRYSES------LAGS-----------------LLPDWLGTNG--------LRRRGRQ 300

  Fly   925 SSSASSEIMV---IHNNNYICR---------LCNYKTNLKANFQ-LHSKTDKHLQKLNFINHIRE 976
            :.:....:.:   .|.|:|:.|         ||..:..:|..|| ...|..|.:|.:..:     
  Fly   301 TYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKEL----- 360

  Fly   977 GGPQNEYKMQYQQQQLAA 994
                ||.:.|.|.|:.||
  Fly   361 ----NEQEKQAQAQKAAA 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zfh2NP_524623.2 C2H2 Zn finger 561..581 CDD:275368
C2H2 Zn finger 616..633 CDD:275368
C2H2 Zn finger 1515..1542 CDD:275371
C2H2 Zn finger 1543..1564 CDD:275371
Homeodomain 1798..1857 CDD:459649
Homeodomain 2155..2211 CDD:459649
Homeodomain 2761..2817 CDD:459649
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 13/55 (24%)
Blue background indicates that the domain is not in the aligned region.

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