DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zfh2 and lab

DIOPT Version :10

Sequence 1:NP_524623.2 Gene:zfh2 / 43795 FlyBaseID:FBgn0004607 Length:3005 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:693 Identity:138/693 - (19%)
Similarity:218/693 - (31%) Gaps:224/693 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1606 DVS------PIELETHLNKETRHLSPTPMSLDS------QSHQKHLATFAALLKQQQC------- 1651
            |||      |.....|.|....:.:.|..:.::      |.||.||.     |:|||.       
  Fly     3 DVSSMYGNHPHHHHPHANAYDGYSTTTASAANASSYFAPQQHQPHLQ-----LQQQQQHQHLQQP 62

  Fly  1652 ----------NSDAGGLHPEALSMSTGEMPPQLQGLQNLQHIQQHFGAVAAAAGLPINPVDMLNI 1706
                      :|..|..:|:..:..|   ||.....|.:|..||.            .......:
  Fly    63 QQHLTYNGYESSSPGNYYPQQQAQLT---PPPTSSHQVVQQHQQQ------------QQAQQQQL 112

  Fly  1707 MQFHHLMSLNFMNLAPPLVFGANAAGNAVSGPSALNNSITTSTATSASGL---------GDTHLT 1762
            ....||.|                       |||....|||||.|...|.         .|::..
  Fly   113 YPHSHLFS-----------------------PSAAEYGITTSTTTGNPGTPLHPSSHSPADSYYE 154

  Fly  1763 S-GVSSIPVDSGKATAVPPQ-----TQLNANANSQQLASNQKRARTRITDDQLKILRAHFDINNS 1821
            | .|.|....:..||..||.     |..||:|.|.   :.|::.:..|...:..::..:.|    
  Fly   155 SDSVHSYYATAAVATVAPPSNSSPITAANASATSN---TQQQQQQAAIISSENGMMYTNLD---- 212

  Fly  1822 PSEESIMEMSQKANLPMKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTP 1886
                 .|..:.:|..|:    |.:...:                       .|:|.....|...|
  Fly   213 -----CMYPTAQAQAPV----HGYAGQI-----------------------EEKYAAVLHASYAP 245

  Fly  1887 ---LNDTCSVAVTGPMTSSTISLPPSGNINLSSKENATSKVLAAGKANASGPVTFSATVPVSTPL 1948
               |.|      ..||                 .:.||...:...:.:.:|.....|.       
  Fly   246 GMVLED------QDPM-----------------MQQATQSQMWHHQQHLAGSYALDAM------- 280

  Fly  1949 SRPESTNSSGNISDYIGNNIFFGQLGSKEQILPYSLDGQIKSEPQDDMIGATDFAYQTKQH---- 2009
                   .|..:..::.:.:..|.||:... .|:....|::.:.|.        .:|..||    
  Fly   281 -------DSLGMHAHMHHGLPHGHLGNLAN-NPHQQQPQVQQQQQQ--------PHQQPQHPQNQ 329

  Fly  2010 SSFSFLKQQQDLVDPPEQCLTNQNADTAQDQSLLAGSSLASNCQSQQQINIFETKSESGSSDV-- 2072
            |..:..:..|:.|.|.......|........|..:.|:.|||.......   ::||.:.||.:  
  Fly   330 SPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPAST---QSKSPNHSSSIPT 391

  Fly  2073 ---------LSRPPSPNSGAAGNVYGSMNDL-LNQQLE-----------------NMGSNMGPPK 2110
                     :.:|.:|...|:|  ..||:|. :|.||:                 .:|.|..|  
  Fly   392 YKWMQLKRNVPKPQAPKLPASG--IASMHDYQMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSP-- 452

  Fly  2111 KMQIVGKTFEKNVAPMVTSGSVSTQFESN-------SSNSSSSSSSTSGGKRANRTRFTDYQIKV 2168
              .|.|....:|...|..|.:.:.....|       |.:..||.|.:|....:.||.||:.|:..
  Fly   453 --GIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTE 515

  Fly  2169 LQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWFQNARQKQRK 2211
            |::.|..|.|...:....::..|.|:...:.:||||.|.||:|
  Fly   516 LEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKK 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zfh2NP_524623.2 C2H2 Zn finger 561..581 CDD:275368
C2H2 Zn finger 616..633 CDD:275368
C2H2 Zn finger 1515..1542 CDD:275371
C2H2 Zn finger 1543..1564 CDD:275371
Homeodomain 1798..1857 CDD:459649 6/58 (10%)
Homeodomain 2155..2211 CDD:459649 18/55 (33%)
Homeodomain 2761..2817 CDD:459649
labNP_476613.1 Homeodomain 505..558 CDD:459649 18/52 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.