DRSC/TRiP Functional Genomics Resources

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Protein Alignment zfh2 and exex

DIOPT Version :10

Sequence 1:NP_524623.2 Gene:zfh2 / 43795 FlyBaseID:FBgn0004607 Length:3005 Species:Drosophila melanogaster
Sequence 2:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster


Alignment Length:529 Identity:106/529 - (20%)
Similarity:178/529 - (33%) Gaps:167/529 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1831 SQKANLPMKVVKHWFRNTLFKERQRNKDSP----YNFNNPPSTTLNLEEYERTGQAKVTP----L 1887
            |..:.|.:..::| ..::|..:|...:.||    |:..:..||.        :.::::||    .
  Fly    22 SMPSQLLLSHIQH-HSSSLHHQRSHQRSSPPAQDYDQGSNQSTL--------SPRSQITPSPPAA 77

  Fly  1888 NDTCSVAVTG-PMTSSTISLPPSGNINLSSKENATSK---VLAAGKANASGPVTFSATVP----- 1943
            :.|.|.|.|| |:::.|.:|.|.|..:.|..|:..|.   :|.|.....:||.......|     
  Fly    78 SPTHSAATTGSPVSTYTPALSPGGAQDSSQTESGQSSQMPLLVAPMPVGTGPPHSHPPPPHPRLY 142

  Fly  1944 ----------------VST-PLSR--------------------PESTNSSGNISDYIGNNIFFG 1971
                            :.| ||.|                    |.|...:.|...:.|..:...
  Fly   143 VEGFPPPHHVPHPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPPVSPQPAANHLSHSGATMATT 207

  Fly  1972 QLGSKEQILP---YSLDGQI------KSEPQ----DDMIGATDFAYQTKQHSSFSFLKQQQDLVD 2023
            .|....|..|   :.:|..:      ..|||    ||.:.|..:|               :|..:
  Fly   208 TLLPPAQSQPKKSFCIDALLAKSQHQSGEPQPIIVDDRLAALHYA---------------RDQAE 257

  Fly  2024 PPEQCLTNQNADTAQDQSLLAGSSLASNCQSQQQINIFE-------------TKSESGSSDVLSR 2075
            .....:|..||..|..    |.:|.|.....|:.:....             ::|||.:|...|.
  Fly   258 LNHAFVTASNAAAAAQ----AAASAAGGISEQEALQRIRDSREYDSPSPDGMSRSESPTSSHRSS 318

  Fly  2076 PP-SPNSGAAGNVYGSMN-DLLNQQLENMGSNMGPP------------------KKMQIV---GK 2117
            || ||........:|::: ..|:.::.:.......|                  ...|::   |.
  Fly   319 PPISPGCEDQQQPHGALHPQHLSMRMSDFHDEFKKPIPPHSPIRPQDFPLYAGGHPYQLLAQGGS 383

  Fly  2118 TFEKNVAPMVTSGS------------VSTQFESNS----------SNSSSSSSSTSGGKRANRTR 2160
            .|.:   |:..||.            ...|||..:          ..::....:..|..|..||.
  Fly   384 AFHR---PLDPSGKPIPIPMGHNFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKTRRPRTA 445

  Fly  2161 FTDYQIKVLQEFFENNSY---PKDSDLEYLSKLLLLSPRVIVVWFQNARQKQRKIYENQPNNTLF 2222
            ||..|:..|::.|:.|.|   ||..:   ::..|:||...:.:||||.|.|.::..:.|.     
  Fly   446 FTSQQLLELEKQFKQNKYLSRPKRFE---VASGLMLSETQVKIWFQNRRMKWKRSKKAQQ----- 502

  Fly  2223 ENEETKKQN 2231
            |.:|..|.|
  Fly   503 EAKERAKAN 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zfh2NP_524623.2 C2H2 Zn finger 561..581 CDD:275368
C2H2 Zn finger 616..633 CDD:275368
C2H2 Zn finger 1515..1542 CDD:275371
C2H2 Zn finger 1543..1564 CDD:275371
Homeodomain 1798..1857 CDD:459649 5/25 (20%)
Homeodomain 2155..2211 CDD:459649 21/58 (36%)
Homeodomain 2761..2817 CDD:459649
exexNP_648164.1 Homeodomain 440..496 CDD:459649 21/58 (36%)
Blue background indicates that the domain is not in the aligned region.

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