DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zfh2 and ind

DIOPT Version :10

Sequence 1:NP_524623.2 Gene:zfh2 / 43795 FlyBaseID:FBgn0004607 Length:3005 Species:Drosophila melanogaster
Sequence 2:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster


Alignment Length:376 Identity:86/376 - (22%)
Similarity:121/376 - (32%) Gaps:146/376 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1913 NLSSKENATSKVLAAGKANASGPVTFSATVPVSTPLSRPESTNSSGNISDYIGNNIFFGQLGSKE 1977
            |||.|:.....  ..|...|:..|..:|.:|....|..|.|         |:|:.:|  .||.::
  Fly    16 NLSQKKEKLGS--PGGSPTAAAAVAAAAMLPSIPMLPYPAS---------YVGSYLF--SLGIQQ 67

  Fly  1978 QILPYSLDGQIKSEPQDDMIGATDFAYQTKQHSSFSFLKQQQDLVDPPEQCLTNQNADTAQDQSL 2042
            |                                     :|||.                .|.|..
  Fly    68 Q-------------------------------------QQQQQ----------------QQQQHA 79

  Fly  2043 LAGSSLASNCQSQQQ---------------INIFETK-SESGSSDVLSRPPSPNSGAAGNVYGSM 2091
            .|.::.|:...:.||               ..:|.:| ..||.|:.....|||...|..|     
  Fly    80 AAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPN----- 139

  Fly  2092 NDLLNQQLENMGSNMGPPKKMQIVGKTFEKNVAPMVTSGSVST----------------QFESNS 2140
                :|||..:.:..|.|    :||...........||.|.|:                :|:..|
  Fly   140 ----SQQLPPIHNLYGSP----VVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGKRFKHES 196

  Fly  2141 S---NSSSSSSSTSGG---------------KRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYL 2187
            |   |||...:.:|||               ||. ||.||..|:..|:..|.:|:        ||
  Fly   197 SCSPNSSPLKNHSSGGPVEITPLINDYADSSKRI-RTAFTSTQLLELEREFSHNA--------YL 252

  Fly  2188 SKL--------LLLSPRVIVVWFQNARQKQRKIYENQPNNTLFENEETKKQ 2230
            |:|        |.||.:.:.:||||.|.||:|.....|...|..|.....|
  Fly   253 SRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNGSPQ 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zfh2NP_524623.2 C2H2 Zn finger 561..581 CDD:275368
C2H2 Zn finger 616..633 CDD:275368
C2H2 Zn finger 1515..1542 CDD:275371
C2H2 Zn finger 1543..1564 CDD:275371
Homeodomain 1798..1857 CDD:459649
Homeodomain 2155..2211 CDD:459649 23/63 (37%)
Homeodomain 2761..2817 CDD:459649
indNP_996087.2 Homeodomain 228..284 CDD:459649 24/64 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.