DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf3 and taf8

DIOPT Version :10

Sequence 1:NP_651923.2 Gene:Taf3 / 43793 FlyBaseID:FBgn0026262 Length:1406 Species:Drosophila melanogaster
Sequence 2:XP_005162360.1 Gene:taf8 / 393256 ZFINID:ZDB-GENE-040426-1013 Length:308 Species:Danio rerio


Alignment Length:329 Identity:64/329 - (19%)
Similarity:118/329 - (35%) Gaps:89/329 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VVVAQITQTIGYSCTLSAPLELLQDILQKFVQEFARDMHRHMEHANRIEPNLKDARLSIKNLSIN 77
            |||:.:....|:.....|.:|.|.:::|.::.|..|....:.||..|..|.|.|..:::..:..|
Zfish    41 VVVSALLTECGFDSAEKAVVETLTEMMQSYITEVGRCAKANCEHTARSTPTLSDVVITLVEMGFN 105

  Fly    78 VQELLDYIGNVEPVGF----IRDVPQFPIGKSVNMNFLKPGSAETLTRPVYIFEYLPPMQDPE-- 136
            |..|..|....:.:..    |.:.|..|  ||:.       :.:..|.|.:|..:.|...||.  
Zfish   106 VDTLPVYAKRSQRMVITAPPITNAPVVP--KSLT-------AGQKRTHPAHIPSHFPDFPDPHTY 161

  Fly   137 -----LREIPADVQ----KEFSEKQE-------FCSKAEYSSTNAADKLGAKHIDSISPNTVINF 185
                 .||..:|.|    |..|::::       |.:|...:.:...|.:.|..:.:..|:.:   
Zfish   162 IRTPTFREPVSDYQVVREKAASQRRDVERALTRFMAKTGETQSLFKDDISAFPLIAAKPSPI--- 223

  Fly   186 RSNAFELDVGSSVREMSSVVMTTGGFISPAIEGKLPEDIIPDIVEKFLGLDAPFSPTIIVNSLQK 250
                                        |.:...||.::....:|:             .:|.::
Zfish   224 ----------------------------PYLSALLPSELELQSLEE-------------TDSSEQ 247

  Fly   251 SPQLALSDRDKTVNPRKIIPSETKIFKQNAALLTSG------HSESSIIYASNNHTMLTVTTPKK 309
            ..|:   |.|.  |...|:..::...|:|..|...|      .:|.::|   :|..:..|..||.
Zfish   248 DDQM---DNDN--NTSHIMQDDSGADKENEVLPPGGVVPSGKANEENMI---DNPYLRPVKKPKV 304

  Fly   310 NRKQ 313
            .||:
Zfish   305 RRKK 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf3NP_651923.2 HFD_TAF3 4..95 CDD:467041 20/85 (24%)
TNG2 <1289..1387 CDD:227367
PHD_TAF3 1342..1387 CDD:276997
taf8XP_005162360.1 HFD_TAF8 34..117 CDD:467043 20/75 (27%)
TAF8 146..199 CDD:176263 11/52 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.