DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rift and SLC52A3

DIOPT Version :9

Sequence 1:NP_651901.3 Gene:Rift / 43756 FlyBaseID:FBgn0039882 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001357014.1 Gene:SLC52A3 / 113278 HGNCID:16187 Length:469 Species:Homo sapiens


Alignment Length:469 Identity:171/469 - (36%)
Similarity:246/469 - (52%) Gaps:66/469 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SWLVDVLAIFFGIGTWLGVNGTFIQLPLLVDEAPEGWSLPSYLSVMVQIGNLGPLLYTAIQKYSP 137
            ::|:.:|...||:|:|:.:||.:::|||||.|.||||.|||||:|::|:.|:||||.|.:..:.|
Human     2 AFLMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLLHHFRP 66

  Fly   138 KKLNDGWTIHGVLLVGAISCLLTAFFYNQTASVAGTDHSLALFLLTCFTALNACTSSVLFMPYMG 202
            ..|::...|..:|.||.::|::.||.:|.|:.|....||:|..:||.|.||..|||||.|:|:|.
Human    67 SCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDCTSSVTFLPFMS 131

  Fly   203 RFKEQYMVTYFIGEGLSGLLPSVTALIQGIGESGDCVLVNVTESGEE------------------ 249
            |....|:.|:|:|||||||||::.||.||   ||....|||||..:.                  
Human   132 RLPTYYLTTFFVGEGLSGLLPALVALAQG---SGLTTCVNVTEISDSVPSPVPTRETDIAQGVPR 193

  Fly   250 --VYAL------------RKTPPRFDTRVFFLILFALMVLAYVGYALLNSLP------------- 287
              |.||            |..|..|...||||:|..:|....|.:.:|...|             
Human   194 ALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAFFVLQRQPRCWEASVEDLLND 258

  Fly   288 ------LARRE------YAQVTVSEGNKYVYGEADNQPKAEKLSKGQYTYLLLLIGAISLFSNGM 340
                  :..||      ...|..|:|..|:      :.||.........::..|:..::..:|||
Human   259 QVTLHSIRPREENDLGPAGTVDSSQGQGYL------EEKAAPCCPAHLAFIYTLVAFVNALTNGM 317

  Fly   341 FGSIQSYSSAPYGSQAYHLAATLSVIANPVACFMAMFLHFTSLRIITVLSILAGLLTSYVFTTAA 405
            ..|:|:||...||..|||||||||::|||:|..::|||...||..:.|||:|......|....|.
Human   318 LPSVQTYSCLSYGPVAYHLAATLSIVANPLASLVSMFLPNRSLLFLGVLSVLGTCFGGYNMAMAV 382

  Fly   406 LSPLPPLHDQTVGAVLVVTAWTLLVGIVSYTKLGITTVMRAQGGQSLVWVGAITQLGSAIGAVAI 470
            :||.|.|.....|.||:|.:|.|..|.:||.|:.:..|:|.....:|:|.||..||||.:||:.:
Human   383 MSPCPLLQGHWGGEVLIVASWVLFSGCLSYVKVMLGVVLRDLSRSALLWCGAAVQLGSLLGALLM 447

  Fly   471 FFAINYSDLFQAAE 484
            |..:|...||.:|:
Human   448 FPLVNVLRLFSSAD 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RiftNP_651901.3 DUF1011 320..418 CDD:283816 38/97 (39%)
SLC52A3NP_001357014.1 DUF1011 298..395 CDD:310675 38/96 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148947
Domainoid 1 1.000 173 1.000 Domainoid score I3708
eggNOG 1 0.900 - - E1_KOG4255
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12324
Inparanoid 1 1.050 283 1.000 Inparanoid score I2878
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52392
OrthoDB 1 1.010 - - D356719at33208
OrthoFinder 1 1.000 - - FOG0004349
OrthoInspector 1 1.000 - - oto89201
orthoMCL 1 0.900 - - OOG6_105349
Panther 1 1.100 - - O PTHR12929
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3974
SonicParanoid 1 1.000 - - X1135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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