DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and loxl2b

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001074095.1 Gene:loxl2b / 791144 ZFINID:ZDB-GENE-050208-29 Length:762 Species:Danio rerio


Alignment Length:332 Identity:135/332 - (40%)
Similarity:180/332 - (54%) Gaps:29/332 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NKAALAGIQVLR--------EGRVEVSFDFGAS--WGTICSTSWSMREANVVCRQLGLGYASKAS 92
            |..|:...|.||        ||||||..:...|  |||:|...|:..||.|||||||||:||.|.
Zfish   417 NVPAMGFQQRLRLSGGRNPFEGRVEVLVERNGSLVWGTVCGEGWTTMEAMVVCRQLGLGFASNAF 481

  Fly    93 QGTEHGDSRKYPWG-------MVGTLCRGTERRLADCIRESHYPNLCNARNHNVSIAACVSHSAD 150
            |.|.:     :|..       |.|..|.|||..|:.|:....|.:.........:..:|...:.|
Zfish   482 QETWY-----WPGAVNADAVVMSGVRCAGTEMSLSHCLHHGEYLSCPKGGGRFAAGVSCSETAPD 541

  Fly   151 LEIGLVDIERTARLEAVPMSRLTCAMEEHCVSADAYEIRRTNPHAARILLRFSVKASNVGTADVS 215
            |.:....:|:|..||..||..|.||.||:|:::.:   ..|..::.|.|||||.:..|.|.:|..
Zfish   542 LVLNPQVVEQTTYLEDRPMFMLQCAYEENCLASTS---SATPANSPRRLLRFSSQIHNNGQSDFR 603

  Fly   216 PYANYKEWVWHQCHRHYHSMNVFATFDVYDLNYRKVAQGHKASFCLMDSECRPGVRQKYTCGN-T 279
            |..:.:.||||.||||||||.||..:|:...|..|||:||||||||.||||..|:.::|.|.| .
Zfish   604 PKISRENWVWHDCHRHYHSMEVFTHYDLLSTNGTKVAEGHKASFCLEDSECDEGIEKRYECANFG 668

  Fly   280 TQGISVGCADTYTDVLDCQWVDVTRVPINRRYILRVALNPEYKLGEISFENNGAECLLDYTGVRQ 344
            .|||:|||.|||...:||||||:|.|... .||.::.:||.|::.|..:.||..:|...|.|.| 
Zfish   669 EQGITVGCWDTYRHDIDCQWVDITDVKPG-DYIFQIVINPNYEVAESDYTNNIVKCRCRYDGHR- 731

  Fly   345 TTRIFNC 351
             ..::||
Zfish   732 -IWMYNC 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 38/94 (40%)
Lysyl_oxidase 149..351 CDD:460102 89/202 (44%)
loxl2bNP_001074095.1 SR 53..154 CDD:214555
SR 196..291 CDD:214555
SR 316..417 CDD:214555 135/332 (41%)
SR 427..536 CDD:214555 40/113 (35%)
Lysyl_oxidase 540..737 CDD:460102 89/202 (44%)
Blue background indicates that the domain is not in the aligned region.

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