DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and lox

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001072611.1 Gene:lox / 780067 XenbaseID:XB-GENE-491965 Length:417 Species:Xenopus tropicalis


Alignment Length:199 Identity:87/199 - (43%)
Similarity:121/199 - (60%) Gaps:16/199 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 GLVD-------IERTARLEAVPMSRLTCAMEEHCVSADAY--EIRRTNPHAARILLRFSVKASNV 209
            ||.|       |:.:..::.:.|..|.||.||:|:::.||  :||   .:..|:||||..:..|.
 Frog   211 GLPDLVPDPYYIQASIYVQKMSMYNLRCAAEENCLASSAYRSDIR---DYDQRVLLRFPQRVKNQ 272

  Fly   210 GTADVSPYANYKEWVWHQCHRHYHSMNVFATFDVYDL-NYRKVAQGHKASFCLMDSECRPGVRQK 273
            ||||..|......|.||.||:|||||:.|:.:|:.|. :.|:||:||||||||.|:.|..|..::
 Frog   273 GTADFLPSRPRYTWEWHSCHQHYHSMDEFSHYDLLDASSQRRVAEGHKASFCLEDTSCDYGYYRR 337

  Fly   274 YTCGNTTQGISVGCADTYTDVLDCQWVDVTRV-PINRRYILRVALNPEYKLGEISFENNGAECLL 337
            :.|...|||:|.||.|||...:||||:|:|.| |.|  |||:|::||.|.:.|..:.||...|.|
 Frog   338 FACTAHTQGLSPGCYDTYNADIDCQWIDITDVKPGN--YILKVSVNPSYLVPESDYSNNIVRCDL 400

  Fly   338 DYTG 341
            .|||
 Frog   401 RYTG 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555
Lysyl_oxidase 149..351 CDD:460102 87/199 (44%)
loxNP_001072611.1 Lysyl_oxidase 213..412 CDD:460102 85/197 (43%)
Blue background indicates that the domain is not in the aligned region.

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