DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and loxl3a

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001186799.1 Gene:loxl3a / 568839 ZFINID:ZDB-GENE-070818-2 Length:791 Species:Danio rerio


Alignment Length:337 Identity:135/337 - (40%)
Similarity:184/337 - (54%) Gaps:14/337 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VVLSQGWANLNVQNNYRNMMVRLATN--KAALAGIQVLREGRVEVSFDFGASWGTICSTSWSMRE 75
            ::...||.:.......|.:.:..|::  :..:.|.:...|||:||  ...:.||||||.:|:.||
Zfish   431 LICGDGWTSREAMVVCRQLGLGHASSGLRIRMVGGRTDHEGRLEV--QISSRWGTICSDNWTTRE 493

  Fly    76 ANVVCRQLGLGYASKASQGTEHGDSRKY-PWGMVGTLCRGTERRLADCIRESHYPNLCNARNHNV 139
            |.|.||||||.|...|...|.:.||... ...|.|..|:|.|..|.||  :.|....|.......
Zfish   494 AMVACRQLGLKYCLHAITETWYWDSSNVTEMVMSGVKCKGDEMTLTDC--QHHSVVSCKRAGAQF 556

  Fly   140 SIAA-CVSHSADLEIGLVDIERTARLEAVPMSRLTCAMEEHCVSADAYEIRRTNPHAARILLRFS 203
            |... |...::||.:....:|:|..:|..|:..|.||.||:|::..|  .:.:.|:..|.|||||
Zfish   557 SAGVICSDMASDLVLNAPLVEQTVYIEDRPLHLLYCAAEENCLAKSA--AQASWPYGHRRLLRFS 619

  Fly   204 VKASNVGTADVSPYANYKEWVWHQCHRHYHSMNVFATFDVYDLNYRKVAQGHKASFCLMDSECRP 268
            .:..|:|.||..|......||||:||||||||::|..:|:..||..|||.||||||||.|:||..
Zfish   620 SEIHNIGKADFRPRLGRHSWVWHECHRHYHSMDIFTYYDLLSLNGTKVADGHKASFCLEDTECHE 684

  Fly   269 GVRQKYTCGN-TTQGISVGCADTYTDVLDCQWVDVTRV-PINRRYILRVALNPEYKLGEISFENN 331
            ||.::|.|.| ..|||:|||.|.|...:||||:|:|.| |.|  |||:|.:||.:::.|..|.||
Zfish   685 GVSKRYECANFGEQGITVGCWDLYRHDIDCQWIDITDVSPGN--YILQVIINPNFEVAESDFTNN 747

  Fly   332 GAECLLDYTGVR 343
            ...|...|.|.|
Zfish   748 AMRCNCKYDGHR 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 37/86 (43%)
Lysyl_oxidase 149..351 CDD:460102 91/197 (46%)
loxl3aNP_001186799.1 SR 39..138 CDD:214555
SR 179..271 CDD:214555
SR 293..393 CDD:214555
SR 460..563 CDD:214555 39/106 (37%)
Lysyl_oxidase 568..765 CDD:460102 91/196 (46%)
Blue background indicates that the domain is not in the aligned region.

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