DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and loxl5a

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001424462.1 Gene:loxl5a / 567769 ZFINID:ZDB-GENE-070705-186 Length:488 Species:Danio rerio


Alignment Length:272 Identity:109/272 - (40%)
Similarity:147/272 - (54%) Gaps:24/272 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GDSRKYPWGMVGTLCRGTERRLAD------CIRESHYPNLCNARNHNVSIAACVSHSADLEI-GL 155
            |:.|.....:|....||.|..:.|      ..|.|.| ||....|.|.|......|.....: ||
Zfish   220 GNVRNVRNPLVQVEARGGESMIDDEPTNHQANRNSFY-NLLPYGNTNRSPQRETGHGTRYFLNGL 283

  Fly   156 VD-------IERTARLEAVPMSRLTCAMEEHCVSADAY--EIRRTNPHAARILLRFSVKASNVGT 211
            .|       |:..:.::.|.|..|.||.||:|:|:.||  .:|..:   .|:||||..:..|.||
Zfish   284 PDLIPDPYYIQAASYIQRVQMYTLRCAAEENCLSSSAYSSSVRDLD---YRVLLRFPQRVKNQGT 345

  Fly   212 ADVSPYANYKEWVWHQCHRHYHSMNVFATFDVYD-LNYRKVAQGHKASFCLMDSECRPGVRQKYT 275
            ||..|...:.:|.||.||:|||||:.|:.:|:.| ...||||:||||||||.|:.|.||||::|.
Zfish   346 ADFLPVKPHYDWEWHSCHQHYHSMDAFSNYDLLDAATGRKVAEGHKASFCLEDTSCDPGVRRRYA 410

  Fly   276 CGNTTQGISVGCADTYTDVLDCQWVDVTRVPINRRYILRVALNPEYKLGEISFENNGAECLLDYT 340
            |...|||:..||.|||...:||||:|:|.|.:. .|||:|.:||.:::.|..|.||...|.:.||
Zfish   411 CTAHTQGLGPGCYDTYHANIDCQWIDITDVSLG-DYILKVTVNPGFQVQESDFSNNVVRCDIRYT 474

  Fly   341 GVRQTTRIFNCR 352
            |:...|.  |||
Zfish   475 GLYVQTN--NCR 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 12/43 (28%)
Lysyl_oxidase 149..351 CDD:460102 90/212 (42%)
loxl5aNP_001424462.1 None

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