DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and LOC560447

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001429755.1 Gene:LOC560447 / 560447 -ID:- Length:1016 Species:Danio rerio


Alignment Length:131 Identity:43/131 - (32%)
Similarity:57/131 - (43%) Gaps:23/131 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GRVEVSFDFGASWGTICSTSWSMREANVVCRQLGLGYASKASQGTEHGDSRKYPW-GMVGTLCRG 114
            ||||:.::  ..|||:|..||.|.:|.|||||:|.|.|..|||....|......| ..||  |.|
Zfish   151 GRVEIQYN--GVWGTVCDDSWDMNDAAVVCRQMGCGGAVSASQSASFGQGSGPIWLDDVG--CSG 211

  Fly   115 TERRLADCIRESHYPNLCNARNHNVSIAACVSHSADLEIGLVDIERTARLEAVPMSRLTCAMEEH 179
            :|..|..|.|:....:.|             .||.|  .|:|..:...:|..:   ||....:..
Zfish   212 SESSLIQCSRKGFGEHNC-------------GHSED--AGVVCTQDNGKLSDI---RLVDGFDSC 258

  Fly   180 C 180
            |
Zfish   259 C 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 34/85 (40%)
Lysyl_oxidase 149..351 CDD:460102 7/32 (22%)
LOC560447NP_001429755.1 None

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