DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and Loxl4

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001101062.1 Gene:Loxl4 / 309380 RGDID:1308588 Length:758 Species:Rattus norvegicus


Alignment Length:320 Identity:139/320 - (43%)
Similarity:179/320 - (55%) Gaps:13/320 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NKAALAGIQVLREGRVEVSFDFGA--SWGTICSTSWSMREANVVCRQLGLGYASKASQGTEH--G 98
            ||..|||.:...||.|||..:...  .|||:||..|.:.||.|.|||||||:|:.|.:.|.:  |
  Rat   421 NKVRLAGGRNSEEGVVEVQVEVNGVPRWGTVCSDHWGLTEAMVTCRQLGLGFANFAIKDTWYWQG 485

  Fly    99 DSRKYPWGMVGTLCRGTERRLADCIRESHYPNLCNARNHNVSI-AACVSHSADLEIGLVDIERTA 162
            ........|.|..|.|||..|..|.|  |.|..|:..:...|. .||::.:.||.:....::.||
  Rat   486 TPEAKEVVMSGVRCSGTEMALQQCQR--HGPVHCSHGSGRFSAGVACMNSAPDLVMNAQLVQETA 548

  Fly   163 RLEAVPMSRLTCAMEEHCVSADAYEIRRTNPHAARILLRFSVKASNVGTADVSPYANYKEWVWHQ 227
            .||..|:|.|.||.||:|:|..|..:  ..|:..|.|||||.:..|:|.||..|.|....|:|||
  Rat   549 YLEDRPLSMLYCAHEENCLSKSADHM--DWPYGHRRLLRFSSQIYNLGRADFRPKAGRHSWIWHQ 611

  Fly   228 CHRHYHSMNVFATFDVYDLNYRKVAQGHKASFCLMDSECRPGVRQKYTCGN-TTQGISVGCADTY 291
            |||||||:.||..:|:..||..|||:||||||||.|:.|..||:::|.|.| ..||::|||.|||
  Rat   612 CHRHYHSIEVFTHYDLLTLNGSKVAEGHKASFCLEDTNCPSGVQRRYACANFGEQGVAVGCWDTY 676

  Fly   292 TDVLDCQWVDVTRVPINRRYILRVALNPEYKLGEISFENNGAECLLDYTGVRQTTRIFNC 351
            ...:||||||:|.|... .||.:|.:||...:.|..|.||...|...|.|  |...:.||
  Rat   677 RHDIDCQWVDITDVSPG-DYIFQVVVNPTNDVAESDFSNNMIRCRCKYDG--QRVWLHNC 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 37/89 (42%)
Lysyl_oxidase 149..351 CDD:460102 92/202 (46%)
Loxl4NP_001101062.1 SR 33..133 CDD:214555
SRCR 177..287 CDD:459844
SR 313..413 CDD:214555
SR 447..530 CDD:214555 33/84 (39%)
Lysyl_oxidase 535..733 CDD:460102 92/202 (46%)
Blue background indicates that the domain is not in the aligned region.

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