DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and Marco

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_034896.1 Gene:Marco / 17167 MGIID:1309998 Length:518 Species:Mus musculus


Alignment Length:469 Identity:83/469 - (17%)
Similarity:158/469 - (33%) Gaps:138/469 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TSGNAQRNNKEGSSHKLPSLESWFGKKTTSEATAQNQIVGDNPQNNSVGNYFNQNLNEDHHDHQF 78
            ::||...|::.......|..::.|.::.|.          |:|....           :.||.| 
Mouse    29 STGNTAENHRHPIPDDPPLFQACFPRRATV----------DDPLPAL-----------EIHDLQ- 71

  Fly    79 AQQNPDNALDNSQTWHNLDRIHQNFQTMDMQ------PYQEYQDNNESGWVDLNNDNQFQQPDNN 137
                 |..:.:|:.:|.   ...|.:...:|      |.:|..|:.....|     |.|:.|.:.
Mouse    72 -----DEPISSSKFFHT---AVNNLELEVLQPSIPDAPAEEDLDSTVKSEV-----NSFESPVSQ 123

  Fly   138 DPNANDLNLWNMETGPGQVFEAPVLPAIPWNNDDNFNDNFTEDDAIS----QISFDSEIKSETDS 198
            ..:.:.:    .|...|...:..:..|:..:::.:.|...::||:..    .::.|.|...:.:.
Mouse   124 QFSTDGI----FEAFSGDSVQVDIDSALDEDSESSLNQKVSQDDSADDSALSLTADDETCLDNND 184

  Fly   199 MVSRKR--KRNREDAQNSYDKKKRIRDENETFFKSQKLTHENLLNQNILNEAHFRTAVKLVLRPC 261
            :.||..  |:..|....|..:..||:|..:...|..::|.    ....|..:|.:..:::.|...
Mouse   185 ISSRYNLGKQLGEGGFGSVFEGIRIQDGLQVAVKFAQMTP----RMRDLCSSHDQPPLEITLASM 245

  Fly   262 FSN----LRIIKVYYTNCSSEQVFR--------------CLADFERDKADIITEKD--------- 299
            .|:    ..||::.     ..|||:              .|..|.:.|..::||:.         
Mouse   246 ASSGSRCANIIQLL-----DWQVFKDHYVMVMERPTPSMDLEAFLQLKGGVLTEQTAQTIMGQAV 305

  Fly   300 ---------NLKRRDMNLAKLKTRMDETE-KVYD---------DAQADLDNKKVGIPPGTLASGC 345
                     .:..||:.|..|....:..| |:.|         .|.:.....:..:||.....||
Mouse   306 HAANVCCYREVFHRDIKLQNLLVNPNTLEVKLIDFGCGDYMIESAYSTFSGTEAYMPPEFYKRGC 370

  Fly   346 FRAKQKYETVAFEHGAGELQY-----EFSKQYRIASRLTAYGGWFYPDARNLLQHNW------QF 399
            :.||.     |..:..|.|.:     :|...|.:          :|      |:|:|      |.
Mouse   371 YHAKP-----ATVYSLGVLLFTLLHGDFPTTYDL----------YY------LEHDWSKFTLSQE 414

  Fly   400 LCDNAGPDIEQLKE 413
            .||.....::|:.|
Mouse   415 CCDLMWACLQQIPE 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 17/91 (19%)
Lysyl_oxidase 149..351 CDD:460102 46/253 (18%)
MarcoNP_034896.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..426 55/308 (18%)
Collagen 149..198 CDD:460189 8/48 (17%)
gly_rich_SclB <175..>401 CDD:468478 45/249 (18%)
SR 423..518 CDD:214555 2/6 (33%)

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