DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and Loxl1

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_034859.2 Gene:Loxl1 / 16949 MGIID:106096 Length:607 Species:Mus musculus


Alignment Length:267 Identity:98/267 - (36%)
Similarity:142/267 - (53%) Gaps:43/267 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 SQGTEHGDSRKYPWG--MVGTLCRGTE--RRLADCIRESHYPNLCNARNHNVSIAACVSHSADLE 152
            |||.|...:::   |  .||::.|..:  |.|.|.:.:.:|                        
Mouse   374 SQGGERNGAQQ---GRLSVGSVYRPNQNGRGL
PDLVPDPNY------------------------ 411

  Fly   153 IGLVDIERTARLEAVPMSRLTCAMEEHCVSADAYEIRRTNPHAARILLRFSVKASNVGTADVSPY 217
                 ::.:..::...:..|.||.||.|:::.||....|: :..|:||||..:..|.||||..|.
Mouse   412 -----VQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATD-YDLRVLLRFPQRVKNQGTADFLPN 470

  Fly   218 ANYKEWVWHQCHRHYHSMNVFATFDVYDLNY-RKVAQGHKASFCLMDSECRPGVRQKYTCGNTTQ 281
            .....|.||.||:|||||:.|:.:|:.|.:. :|||:||||||||.||.|..|..::|.|.:.||
Mouse   471 RPRHTWEWHSCHQHYHSMDEFSHYDLLDASTGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHTQ 535

  Fly   282 GISVGCADTYTDVLDCQWVDVTRV-PINRRYILRVALNPEYKLGEISFENNGAECLLDYTGVRQT 345
            |:|.||.|||...:||||:|:|.| |.|  |||:|.:||:|.:.|..|.||...|.:.|||...:
Mouse   536 GLSPGCYDTYNADIDCQWIDITDVQPGN--YILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVS 598

  Fly   346 TRIFNCR 352
            |.  ||:
Mouse   599 TT--NCK 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 12/47 (26%)
Lysyl_oxidase 149..351 CDD:460102 84/203 (41%)
Loxl1NP_034859.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..111
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..323
Interaction with FBLN5. /evidence=ECO:0000269|PubMed:14745449 334..402 9/31 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..388 4/13 (31%)
Lysyl-oxidase like 403..607 77/205 (38%)
Lysyl_oxidase 403..602 CDD:460102 75/200 (38%)
Blue background indicates that the domain is not in the aligned region.

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