DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and Dmbt1

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_006507361.2 Gene:Dmbt1 / 12945 MGIID:106210 Length:2061 Species:Mus musculus


Alignment Length:218 Identity:55/218 - (25%)
Similarity:89/218 - (40%) Gaps:51/218 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EGRVEVSFDFGASWGTICSTSWSMREANVVCRQLGLGYASKASQGTEHGDSRKYPWG--MVGTL- 111
            :|||||.:.  .||||:|..||..::|:|||:|||.|::..|..|...|:..    |  ::|.: 
Mouse    43 QGRVEVLYQ--GSWGTVCDDSWDTQDADVVCQQLGCGHSVSAPGGAHFGEGS----GNILLGAVH 101

  Fly   112 CRGTERRLADCIRESHYPNLCNARNHNVSIAACVSHSADLEIGLVDIERTARLEAVPMSRLTCAM 176
            |.|.|..|:.|..:..|.:.|..|.....:.:.||::|:......|.....||         ...
Mouse   102 CSGWESYLSSCQHDGWYNHDCGHREDAGVVCSEVSYTAEQSTEGTDSGLAVRL---------VNG 157

  Fly   177 EEHC--------------VSADAYEIRRTN--------------PHAARILLRFSVKASNVGTAD 213
            .:.|              |..|::::...|              |..|    ||...:..:...|
Mouse   158 GDRCQGRVEILYQGSWGTVCDDSWDLNDANVVCRQLGCGLAVSAPGNA----RFGQGSGPIVMDD 218

  Fly   214 VSPYANYKEWVWHQCHRHYHSMN 236
            |: ...|::::|...||.:.|.|
Mouse   219 VA-CGGYEDYLWRCSHRGWLSHN 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 32/88 (36%)
Lysyl_oxidase 149..351 CDD:460102 20/116 (17%)
Dmbt1XP_006507361.2 SR 33..133 CDD:214555 33/95 (35%)
SR 152..252 CDD:214555 18/103 (17%)
SR 301..401 CDD:214555
SR 439..539 CDD:214555
SR 578..678 CDD:214555
SR 717..817 CDD:214555
SR 856..956 CDD:214555
CUB 999..1107 CDD:238001
CUB 1115..1223 CDD:238001
CUB 1241..1349 CDD:238001
CUB 1357..1465 CDD:238001
SR 1486..1585 CDD:214555
CUB 1609..1717 CDD:238001
ZP 1728..1975 CDD:214579
Blue background indicates that the domain is not in the aligned region.

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