DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and Cd5l

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_033820.2 Gene:Cd5l / 11801 MGIID:1334419 Length:352 Species:Mus musculus


Alignment Length:233 Identity:63/233 - (27%)
Similarity:85/233 - (36%) Gaps:70/233 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EGRVEVSFDFGASWGTICSTSWSMREANVVCRQLGLGYA-------SKASQGTEHGDSRKYPWGM 107
            :|||||...  :.|.|:|...|:::.:.|||||||.|.|       :|.:||       |.|..|
Mouse   151 QGRVEVLHQ--SQWSTVCKAGWNLQVSKVVCRQLGCGRALLTYGSCNKNTQG-------KGPIWM 206

  Fly   108 VGTLCRGTERRLADCIRESHYPNLCNARNHNVSIAACVSHSAD--------LEIGLV--DIERTA 162
            ....|.|.|..|..|:. |...|.|             :|..|        .|:.||  |...:.
Mouse   207 GKMSCSGQEANLRSCLL-SRLENNC-------------THGEDTWMECEDPFELKLVGGDTPCSG 257

  Fly   163 RLEA--------------------VPMSRLTCAMEEHCVSADAYEIRRT-NPHAARILLRFSVKA 206
            |||.                    |...:|.|....|    .:.:.|:. .|.|.||.|. .|..
Mouse   258 RLEVLHKGSWGSVCDDNWGEKEDQVVCKQLGCGKSLH----PSPKTRKIYGPGAGRIWLD-DVNC 317

  Fly   207 SNVGTADVSPYANYKEWVWHQCHRHYHSMNVFAT-FDV 243
            |  |......:..::.|.:|.| .|...:.|..| |||
Mouse   318 S--GKEQSLEFCRHRLWGYHDC-THKEDVEVICTDFDV 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 32/92 (35%)
Lysyl_oxidase 149..351 CDD:460102 30/127 (24%)
Cd5lNP_033820.2 SR 27..127 CDD:214555
SR 141..240 CDD:214555 34/111 (31%)
SR 246..348 CDD:214555 24/109 (22%)
Blue background indicates that the domain is not in the aligned region.

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