DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and LOC101885550

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_073802884.1 Gene:LOC101885550 / 101885550 -ID:- Length:3221 Species:Danio rerio


Alignment Length:359 Identity:78/359 - (21%)
Similarity:125/359 - (34%) Gaps:98/359 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GRVEVSFDFGASWGTICSTSWSMREANVVCRQLGLGYASKASQGTEHGDSRKYPWGMVGTLCRGT 115
            ||:||..:  |.||::|...|.:.:|.|||||||.|.|.:|...:..|......| :....|||.
Zfish  1706 GRLEVYHN--AVWGSVCDDLWDISDAQVVCRQLGCGAALRADGNSAFGAGEGVVW-LNRVQCRGN 1767

  Fly   116 ERRLADCIRESHYPNLCNARNHNVSIAACVSHSADL-EIGLVDIERTARLEAVPMSRLTCAMEEH 179
            |..|.||.........|:.:.|  :...|    ||| :|.:.....|:...:..:|:        
Zfish  1768 ELHLWDCPLSLKKHTNCSHKEH--AGLTC----ADLPDISVSTTPATSASSSAAVSQ-------- 1818

  Fly   180 CVSADAYEIRRTNPHAA----------------------------RILLRFSVKASNVGTADVSP 216
            .||:.:....:|.|...                            |::.|...|..:..|.:   
Zfish  1819 TVSSTSVSPPQTGPETLPVPPVLVIVLGVVLLLLLVPLLILIQQNRVMRRALSKRRHRTTTE--- 1880

  Fly   217 YANYKEWVWHQCHRHYHSMNVFATFDVYDLNYRKVAQGHK-ASFCLMDSECRPGVRQKYTCG--- 277
             |.|:| :.|: |:|:.....|        |..::..|:: |...|.:.|.:.......|..   
Zfish  1881 -AVYEE-IQHK-HKHFTHRGRF--------NSEELQSGYEDADEFLSEKEFKTAYYDDVTSNSGL 1934

  Fly   278 --NTTQGISVGCAD------------------TYTDVLDCQWVDVTRVPINRRYILRVALN---- 318
              |..:.|:.|..|                  :|.||:..:...:.:...|..|...|.:|    
Zfish  1935 EENMVKEITPGYYDDVIADGLKPDLETEDRPESYDDVMMSEETSIIKKVDNPEYYDDVIINGQNL 1999

  Fly   319 --------PEYKLGEISFENNGAECLLDYTGVRQ 344
                    .||  .::...|.....||||..|.:
Zfish  2000 DHLTEGDQEEY--DDVKNNNEDERNLLDYDDVEE 2031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 30/84 (36%)
Lysyl_oxidase 149..351 CDD:460102 46/261 (18%)
LOC101885550XP_073802884.1 None

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