DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and dmbt1

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_031761355.1 Gene:dmbt1 / 100216258 XenbaseID:XB-GENE-6000361 Length:880 Species:Xenopus tropicalis


Alignment Length:146 Identity:46/146 - (31%)
Similarity:59/146 - (40%) Gaps:40/146 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TNKAALAGIQVLREGRVEVSFDFGASWGTICSTSWSMREANVVCRQLGLGYASKASQGTEHGDSR 101
            ||:.|         ||||:.  :..||.|:|..||.|.:|.|||||.|.|.|.........|...
 Frog   647 TNRCA---------GRVEIL--YAGSWATVCDNSWDMADAEVVCRQTGCGNAVSIHGNAHFGQGN 700

  Fly   102 KYPWGMVGTL------CRGTERRLADCIRESHYPNLCNARNHNVSIAACVSHSADLEIGLVD-IE 159
                   |::      |:|.|..|.||      || .....||     | .||.|..:...| |.
 Frog   701 -------GSILLDEVKCKGNESFLWDC------PN-AGLERHN-----C-QHSEDAGVTCSDGIP 745

  Fly   160 RTARLEAVPMSRLTCA 175
            :|.:|  |..:..:||
 Frog   746 KTIKL--VNGTNSSCA 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 30/91 (33%)
Lysyl_oxidase 149..351 CDD:460102 8/28 (29%)
dmbt1XP_031761355.1 SR 1..101 CDD:214555
SR 108..208 CDD:214555
SR 214..314 CDD:214555
SR 320..420 CDD:214555
SR 427..527 CDD:214555
SR 534..634 CDD:214555
SR 641..741 CDD:214555 39/124 (31%)
SR 748..849 CDD:214555 4/14 (29%)
Blue background indicates that the domain is not in the aligned region.

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