DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and loxl2

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001135520.1 Gene:loxl2 / 100216062 XenbaseID:XB-GENE-1010775 Length:767 Species:Xenopus tropicalis


Alignment Length:320 Identity:138/320 - (43%)
Similarity:177/320 - (55%) Gaps:12/320 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NKAALAGIQVLREGRVEVSFDFGAS--WGTICSTSWSMREANVVCRQLGLGYASKASQGTEH--G 98
            |:..|:|.:...||||||..:...:  |||:||.:|...||.:||||||||:||.|.|.|.:  |
 Frog   426 NQVRLSGGRHPTEGRVEVLMERNGTLRWGTVCSDTWGTMEAMIVCRQLGLGFASHAFQETWYWQG 490

  Fly    99 DSRKYPWGMVGTLCRGTERRLADCIRESHYPNLCNARNHNVSIAACVSHSADLEIGLVDIERTAR 163
            |.......|.|..|.|||..||.|..:....|.........:..:||..:.||.:....:|:|..
 Frog   491 DINADDVVMSGVKCSGTEMSLAHCRHDGANINCPRGGGRFAAGVSCVETAPDLVLNAALVEQTTY 555

  Fly   164 LEAVPMSRLTCAMEEHCVSADAYEIRRTNPHAA-RILLRFSVKASNVGTADVSPYANYKEWVWHQ 227
            ||..||..|.||.||.|:|:.|   .||:|... |.|||||.:..|.|.||..|......|:||.
 Frog   556 LEDRPMFMLQCAHEEQCLSSSA---DRTSPTTGYRRLLRFSSQIHNNGQADFRPKTGRHSWIWHD 617

  Fly   228 CHRHYHSMNVFATFDVYDLNYRKVAQGHKASFCLMDSECRPGVRQKYTCGN-TTQGISVGCADTY 291
            ||||||||.||..:|:..||..|||:||||||||.||||...|:::|.|.| ..|||:|||.|.|
 Frog   618 CHRHYHSMEVFTHYDLLSLNGTKVAEGHKASFCLEDSECETDVQKQYACANFGEQGITVGCWDVY 682

  Fly   292 TDVLDCQWVDVTRVPINRRYILRVALNPEYKLGEISFENNGAECLLDYTGVRQTTRIFNC 351
            ...:||||||:|.|... .|..:|.:||..::.|..:.||..:|...|.|.|  ..::||
 Frog   683 RHDIDCQWVDITDVAPG-DYFFQVIINPNQEVAESDYTNNIMKCRCRYDGHR--IWMYNC 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 39/89 (44%)
Lysyl_oxidase 149..351 CDD:460102 92/203 (45%)
loxl2NP_001135520.1 SR 51..152 CDD:214555
SR 194..295 CDD:214555
SR 319..418 CDD:214555
SR 428..536 CDD:214555 41/107 (38%)
Lysyl-oxidase like. /evidence=ECO:0000250 541..744 94/205 (46%)
Lysyl_oxidase 541..739 CDD:460102 92/203 (45%)
Blue background indicates that the domain is not in the aligned region.

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