DRSC/TRiP Functional Genomics Resources

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Protein Alignment Loxl1 and loxl1

DIOPT Version :10

Sequence 1:NP_524607.1 Gene:Loxl1 / 43712 FlyBaseID:FBgn0039848 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001096301.1 Gene:loxl1 / 100124878 XenbaseID:XB-GENE-1002050 Length:525 Species:Xenopus tropicalis


Alignment Length:271 Identity:101/271 - (37%)
Similarity:138/271 - (50%) Gaps:48/271 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 GYASKASQGTEHGDSRKYPWGMVGTLCRGTE--RRLADCIRESHYPNLCNARNHNVSIAACVSHS 148
            |.|....||.          ..||::.||.:  |.|.|.:.:..|                    
 Frog   295 GQAQVEQQGR----------ATVGSVFRGNQNGRGLPDLVPDPSY-------------------- 329

  Fly   149 ADLEIGLVDIERTARLEAVPMSRLTCAMEEHCVSADAYEIRRTNPHAARILLRFSVKASNVGTAD 213
                     ::....::...:..|.||.||||:|:.||....|: :..|:||||..:..|.||||
 Frog   330 ---------VQAATYIQRAHLYSLKCAAEEHCLSSSAYSAEATD-YDVRVLLRFPQRVKNQGTAD 384

  Fly   214 VSPYANYKEWVWHQCHRHYHSMNVFATFDVYDLNY-RKVAQGHKASFCLMDSECRPGVRQKYTCG 277
            ..|....:.|.||.||:|||||:.|:.:|:.|... ||||:||||||||.|:.|..|..::|.|.
 Frog   385 FLPTRPRQSWEWHSCHQHYHSMDEFSHYDLLDATTGRKVAEGHKASFCLEDTTCDFGNLKRYACT 449

  Fly   278 NTTQGISVGCADTYTDVLDCQWVDVTRV-PINRRYILRVALNPEYKLGEISFENNGAECLLDYTG 341
            :.|||:|.||.|||...:||||:|:|.| |.|  |||:|.:||:||:.|..|.||...|.:.|||
 Frog   450 SHTQGLSPGCYDTYNADIDCQWIDITEVKPGN--YILKVVVNPKYKVLESDFTNNVVRCNIHYTG 512

  Fly   342 VRQTTRIFNCR 352
              :.....|||
 Frog   513 --RYASATNCR 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Loxl1NP_524607.1 SR 50..136 CDD:214555 12/51 (24%)
Lysyl_oxidase 149..351 CDD:460102 86/203 (42%)
loxl1NP_001096301.1 Lysyl_oxidase 321..520 CDD:460102 88/232 (38%)

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