DRSC/TRiP Functional Genomics Resources

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Protein Alignment chp and TRIL

DIOPT Version :10

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:NP_055632.2 Gene:TRIL / 9865 HGNCID:22200 Length:811 Species:Homo sapiens


Alignment Length:519 Identity:129/519 - (24%)
Similarity:204/519 - (39%) Gaps:107/519 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   512 SALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLE 576
            |:||: |...||    .....|.|::::...||.|..||.|:|..|:|..:...||:.  .|:||
Human    53 SSLPS-PHDVLT----YSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEK--LSRLE 110

  Fly   577 EISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESF 641
            |:.|..|.|.:::..|...|..||.|:.:.|:|.::.|.:|..|:.|..|.|.||.:..|.|..|
Human   111 ELYLGNNLLQALAPGTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVF 175

  Fly   642 QNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNI 706
            ..|..|..|.:..|::.....:.|.|:|.|                                   
Human   176 APLGNLLYLHLESNRIRFLGKNAFAQLGKL----------------------------------- 205

  Fly   707 KILDLSHNNI--SIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELD 769
            :.|:||.|.:  |:.|...|.|.. ||:.|.|..|:|.:....:|.::|.|..|.|..|.:..|.
Human   206 RFLNLSANELQPSLRHAATFAPLR-SLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLA 269

  Fly   770 FDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDNLFYNGGMEKLDVSHN 834
            .:||...:.|:.:....|.||.:|..:.:|:..|..:|.|.|.|..|....|.:.|         
Human   270 PEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLG--------- 325

  Fly   835 MMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFRSLRYLDISYNYLLRIDDAVFATMP 899
                            .|.||.|.||.:|.: |.|                        :||..|
Human   326 ----------------RLRELSLRNNALSAL-SGD------------------------IFAASP 349

  Fly   900 KLAVLDLSHNR---DLKVMD-KSFMGLENSLIKLGLENISLSTVPEIRLKYL-----REFRLGYN 955
            .|..|||..|.   |.::.. |.:||..:|..:|....:.....|.:|.|||     ::.:.|..
Human   350 ALYRLDLDGNGWTCDCRLRGLKRWMGDWHSQGRLLTVFVQCRHPPALRGKYLDYLDDQQLQNGSC 414

  Fly   956 ELPSIPQELAHNMSNLRMLDLSNNDLTNVPLMTQALPHLRRLMLSGNPITSLNNNSFDGVNEDL 1019
            ..||....|..:.....:...:..::|....:.:.||...:|...|..:..:   ::||...:|
Human   415 ADPSPSASLTADRRRQPLPTAAGEEMTPPAGLAEELPPQPQLQQQGRFLAGV---AWDGAAREL 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 LRR <84..320 CDD:443914
leucine-rich repeat 84..103 CDD:275380
leucine-rich repeat 104..128 CDD:275380
leucine-rich repeat 129..152 CDD:275380
leucine-rich repeat 153..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
leucine-rich repeat 202..226 CDD:275380
leucine-rich repeat 227..250 CDD:275380
leucine-rich repeat 251..279 CDD:275380
leucine-rich repeat 280..326 CDD:275380
leucine-rich repeat 327..348 CDD:275380
leucine-rich repeat 352..375 CDD:275380
PPP1R42 355..564 CDD:455733 17/51 (33%)
leucine-rich repeat 376..401 CDD:275380
leucine-rich repeat 426..450 CDD:275378
leucine-rich repeat 451..474 CDD:275380
LRR_8 473..559 CDD:404697 16/46 (35%)
leucine-rich repeat 475..524 CDD:275380 5/11 (45%)
leucine-rich repeat 500..519 CDD:275380 3/6 (50%)
leucine-rich repeat 525..548 CDD:275380 5/22 (23%)
LRR <540..>834 CDD:443914 81/295 (27%)
leucine-rich repeat 549..574 CDD:275380 8/24 (33%)
leucine-rich repeat 575..598 CDD:275380 8/22 (36%)
leucine-rich repeat 599..622 CDD:275380 8/22 (36%)
leucine-rich repeat 623..646 CDD:275380 9/22 (41%)
leucine-rich repeat 647..730 CDD:275380 15/84 (18%)
leucine-rich repeat 648..673 CDD:275380 6/24 (25%)
leucine-rich repeat 674..705 CDD:275380 0/30 (0%)
LRR <730..1081 CDD:443914 69/299 (23%)
leucine-rich repeat 731..754 CDD:275380 6/22 (27%)
leucine-rich repeat 755..778 CDD:275380 7/22 (32%)
leucine-rich repeat 779..802 CDD:275380 6/22 (27%)
leucine-rich repeat 803..823 CDD:275380 7/19 (37%)
leucine-rich repeat 852..876 CDD:275380 9/23 (39%)
leucine-rich repeat 877..900 CDD:275380 2/22 (9%)
leucine-rich repeat 901..925 CDD:275380 9/27 (33%)
leucine-rich repeat 926..946 CDD:275380 3/19 (16%)
leucine-rich repeat 947..970 CDD:275380 5/27 (19%)
leucine-rich repeat 971..993 CDD:275380 2/21 (10%)
leucine-rich repeat 994..1014 CDD:275380 2/19 (11%)
leucine-rich repeat 1019..1042 CDD:275380 1/1 (100%)
TRILNP_055632.2 leucine-rich repeat 37..61 CDD:275380 4/8 (50%)
LRR 61..>344 CDD:443914 94/374 (25%)
LRR 1 61..81 5/23 (22%)
leucine-rich repeat 62..84 CDD:275380 7/25 (28%)
LRR 2 84..105 8/20 (40%)
leucine-rich repeat 85..108 CDD:275380 8/24 (33%)
LRR 3 108..129 7/20 (35%)
leucine-rich repeat 109..132 CDD:275380 8/22 (36%)
LRR 4 132..153 7/20 (35%)
leucine-rich repeat 133..156 CDD:275380 8/22 (36%)
LRR 5 156..177 8/20 (40%)
leucine-rich repeat 157..180 CDD:275380 9/22 (41%)
LRR 6 180..201 4/20 (20%)
leucine-rich repeat 181..204 CDD:275380 5/22 (23%)
LRR 7 204..223 7/53 (13%)
leucine-rich repeat 205..254 CDD:275380 16/84 (19%)
LRR 8 230..251 7/20 (35%)
LRR 9 254..275 7/20 (35%)
leucine-rich repeat 255..278 CDD:275380 7/22 (32%)
LRR 10 278..299 5/20 (25%)
leucine-rich repeat 279..302 CDD:275380 6/22 (27%)
LRR 11 302..323 7/20 (35%)
leucine-rich repeat 303..326 CDD:275380 8/47 (17%)
LRR 12 326..347 10/45 (22%)
leucine-rich repeat 327..346 CDD:275380 9/43 (21%)
PCC 332..>401 CDD:188093 23/93 (25%)
leucine-rich repeat 351..363 CDD:275378 5/11 (45%)
PHA03378 <478..>579 CDD:223065
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..549
FN3 589..667 CDD:473895
Blue background indicates that the domain is not in the aligned region.

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