Protein Alignment chp and CG5810

DIOPT Version :10

• Sequence 1: NP_001263137.1
• Gene: chp / 43690
• FlyBaseID: FBgn0267435
• Length: 1338
• Species: Drosophila melanogaster
• Sequence 2: NP_650952.2
• Gene: CG5810 / 42513
• FlyBaseID: FBgn0038866
• Length: 428
• Species: Drosophila melanogaster
• Alignment Length: 473
• Identity: 108/473 - (22%)
• Similarity: 172/473 - (36%)
• Gaps: 168/473 - (35%)

  Fly   706 IKILDLSHNN-ISIIHP-----GYFRPAEISLTHLH------LGYNSLMNTTRDVFGNMPHL--- 755
            |..||...|. .::.:|     .||  :|....||.      |..:.|.|..|.:|.|:|.|
  Fly    30 IDSLDCRENTCTNLKYPSASAVAYF--SENVTKHLRKYETLVLHSSDLANLPRKIFLNLPQLVEF 92

  Fly   756 QWLDLSYNWIHELDFDAFKNTK---------------------QLQLVFFGHNYLSDIPQDIFKP 799
            ..|:.....|..:.||..||.|                     ||:.:....|.|.|:|..||:|
  Fly    93 HVLECELQQIESVCFDGAKNLKRLNFGGNALRVLDSNTFELATQLEELNLSDNQLEDLPTTIFRP 157

  Fly   800 VQGLRIVDFSHNHLRGLPDNLFYN-GGMEKLDVSHNMMLKIPS-------SSLSSLAALTLCELH 856
            ::.|:.::.|:|.|..|..::|.. |.::.::|..|.::::|.       ..||..:|
  Fly   158 LKNLQKINLSNNRLITLSQHIFSQLGSLKSINVDSNQLVELPGELFRDQRKHLSEFSA------- 215

  Fly   857 LSNNFISTIHSMDLSNKFRSLRYLDISYNYLLRIDDAVFATMPKLAVLDLS--------HNRDLK 913
            .||..:....     |.||.:.:|.:|:|             |:|..|.||        .|.||:
  Fly   216 QSNQLVRIPF-----NIFREIDHLSLSFN-------------PQLRRLHLSAKINELEATNCDLE 262

  Fly   914 VMDKSFMGLENSLIKLGLENISLSTVPEIRLKYLREFRLGYNELPSIPQELAH------NMSNL- 971
            .::     |:..:|     .:.|...|:     |.|.::      |.||:|.|      |:..|
  Fly   263 SVE-----LDGRVI-----GVQLEANPK-----LHELKI------SQPQDLEHLYLANTNLYRLD 306

  Fly   972 ------RMLDLSNNDLTN---VPLMTQALPHLRRLMLSGNPITSLNNNSFDGVNEDLEMLDISNF 1027
                  :::||...|:.|   :|.:|.| ..|.||..:.:.:||.:
  Fly   307 FLSKASKLVDLDVTDIVNLADLPKITSA-KGLERLSFTYDNLTSNH------------------- 351

  Fly  1028 RLHYFEYGCLDSLPHLRSLKLTAYSHL-----------EHFNIPHLLRHHYNIRQL-----WIEA 1076
                     :|.||||:.|.....||.           |.|.:...   ..|..||     ::|.
  Fly   352 ---------MDMLPHLKDLNYLEISHEKGKEIFIKDLDEDFFVEEA---ELNCGQLADLLEFVEL 404

  Fly  1077 PQPFT----RIVKKGSGP 1090
            |:..|    |:|....||
  Fly   405 PKDTTILEDRLVGDPRGP 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chp	NP_001263137.1	LRR	<84..320	CDD:443914
		leucine-rich repeat	84..103	CDD:275380
		leucine-rich repeat	104..128	CDD:275380
		leucine-rich repeat	129..152	CDD:275380
		leucine-rich repeat	153..177	CDD:275380
		leucine-rich repeat	178..201	CDD:275380
		leucine-rich repeat	202..226	CDD:275380
		leucine-rich repeat	227..250	CDD:275380
		leucine-rich repeat	251..279	CDD:275380
		leucine-rich repeat	280..326	CDD:275380
		leucine-rich repeat	327..348	CDD:275380
		leucine-rich repeat	352..375	CDD:275380
		PPP1R42	355..564	CDD:455733
		leucine-rich repeat	376..401	CDD:275380
		leucine-rich repeat	426..450	CDD:275378
		leucine-rich repeat	451..474	CDD:275380
		LRR_8	473..559	CDD:404697
		leucine-rich repeat	475..524	CDD:275380
		leucine-rich repeat	500..519	CDD:275380
		leucine-rich repeat	525..548	CDD:275380
		LRR	<540..>834	CDD:443914	42/164 (26%)
		leucine-rich repeat	549..574	CDD:275380
		leucine-rich repeat	575..598	CDD:275380
		leucine-rich repeat	599..622	CDD:275380
		leucine-rich repeat	623..646	CDD:275380
		leucine-rich repeat	647..730	CDD:275380	8/29 (28%)
		leucine-rich repeat	648..673	CDD:275380
		leucine-rich repeat	674..705	CDD:275380
		LRR	<730..1081	CDD:443914	95/428 (22%)
		leucine-rich repeat	731..754	CDD:275380	8/28 (29%)
		leucine-rich repeat	755..778	CDD:275380	8/46 (17%)
		leucine-rich repeat	779..802	CDD:275380	8/22 (36%)
		leucine-rich repeat	803..823	CDD:275380	6/19 (32%)
		leucine-rich repeat	852..876	CDD:275380	4/23 (17%)
		leucine-rich repeat	877..900	CDD:275380	3/22 (14%)
		leucine-rich repeat	901..925	CDD:275380	8/31 (26%)
		leucine-rich repeat	926..946	CDD:275380	3/19 (16%)
		leucine-rich repeat	947..970	CDD:275380	8/28 (29%)
		leucine-rich repeat	971..993	CDD:275380	8/31 (26%)
		leucine-rich repeat	994..1014	CDD:275380	5/19 (26%)
		leucine-rich repeat	1019..1042	CDD:275380	2/22 (9%)
CG5810	NP_650952.2	LRR	<61..353	CDD:443914	80/366 (22%)
		leucine-rich repeat	65..88	CDD:275380	6/22 (27%)
		leucine-rich repeat	89..112	CDD:275380	5/22 (23%)
		leucine-rich repeat	113..136	CDD:275380	1/22 (5%)
		leucine-rich repeat	137..160	CDD:275380	8/22 (36%)
		leucine-rich repeat	161..184	CDD:275380	6/22 (27%)
		leucine-rich repeat	185..209	CDD:275380	3/23 (13%)
		leucine-rich repeat	210..231	CDD:275380	8/32 (25%)