DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chp and Toll-9

DIOPT Version :10

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:NP_649214.1 Gene:Toll-9 / 40245 FlyBaseID:FBgn0036978 Length:900 Species:Drosophila melanogaster


Alignment Length:925 Identity:211/925 - (22%)
Similarity:356/925 - (38%) Gaps:285/925 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 ISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLRED 320
            |...|||....|.|  ::.|||.....|:|:.:|                     ||    |::|
  Fly    77 IKDEVIWWQFPNGT--LRDSTKKYAHKLYLDLSH---------------------GN----LKDD 114

  Fly   321 A--FKPARI-REIYMRYCGLTNISPVAFDSLV-----------NSLQILDLSGNNLTKLHHKLFN 371
            :  |:.|:: |::.:   ..|.:...||::|.           .||::|.|.|||..:|   :.:
  Fly   115 SDLFREAKLSRKVTI---WRTEVFSAAFNTLTAAPFRTLYSMRESLKLLSLRGNNFAEL---IPD 173

  Fly   372 NFDVLRVISMRDNKIKIQKPTETFNAV--HYTLLKL----DLSGDR------NDPTNL-QTLRKM 423
            ..|..|.::        :...|..|:|  |..||.|    ||. ||      |:.||: |::...
  Fly   174 AEDFARFVN--------ESRLEASNSVPHHCELLLLHNTTDLY-DRECYLYFNNNTNMGQSITTG 229

  Fly   424 RNMRSL------SISRLGSS--SVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDF 480
            ||..:.      ...:.|||  |:....|... ..|.:|.|:..|:..:...||::|..|:||..
  Fly   230 RNYTNFIKVLKDRFDQHGSSSQSIAWATFPKM-PRLVELDISNCSIEYVSKEAFRNVSNLRRLFM 293

  Fly   481 SENGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHF 545
            |:|.|.:|.:|.|:.:                    :.:::|    :|.|:|            |
  Fly   294 SDNKIMTISHDTFYYV--------------------QGVQYL----DLSFTN------------F 322

  Fly   546 LKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKID 610
            |                   |:...:.....|::|...:...|.|:.|..|..|..|.|..:|:.
  Fly   323 L-------------------TYSYQLQLPTLEMALSLIYGLKIQQNVFKYLPELIYLDLSHSKMT 368

  Fly   611 KIERRAFMNL-DELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQLPNFNF--DYFDQV-GTL 671
            :....||.:| |:|::|||....|..::...|:| ..||.||::.|...::|.  |.||.: .||
  Fly   369 RNSAVAFAHLGDKLKFLSLCYTAIPMVSSTIFKN-TVLEGLDLSGNPYLSYNIIDDAFDGIANTL 432

  Fly   672 SNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHL 736
            ..|....|:  |:.|.::.|.           .|:::|.|:.|||:.:.|..|:..| ||..|.|
  Fly   433 KYLYFERSN--IKDLEWSKSL-----------KNLQVLGLAGNNINALTPAMFQSLE-SLEILDL 483

  Fly   737 GYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHN-YLSDIPQDIFKPV 800
            ..|.:.|..|..|.|...|:.|:|..|.|:.|..:..|:.::|..:..|.| ::.|........|
  Fly   484 SSNHVGNWYRSAFHNNSALRVLNLRSNTINMLSNEMLKDFERLDYLSLGDNDFICDCHLRAVVEV 548

  Fly   801 Q---------GLRIVDFSHNHLRGLPDNLFYNGGMEKLDVSHNMMLK--------IP--SSSLSS 846
            .         ..|::::|.|.:           |.|.:.::.::::.        ||  ..|.|:
  Fly   549 AAANNKDADCSYRLLNYSQNAV-----------GEEVISLAESLIIDRKLWQSRYIPWLQRSYSN 602

  Fly   847 LAALTLCELHLSNNFISTIHSM---------------------DLSNKFRSLRYLDISYNYL--- 887
            :.     |.:.:|:.|....|.                     ||:.||:.|.| :.|..|.   
  Fly   603 IR-----EFNRANHIIKLRFSSEDYMVAKCSAAQPYHLGDLDGDLTLKFQLLDY-EASQYYCFNN 661

  Fly   888 ---LRIDD--AVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIK---LGLENISLSTVPEIRL 944
               |::|:  ....:|..||       .:|..:..:.:.:..||:.   ||.            :
  Fly   662 TDQLQVDELNCQIRSMSDLA-------EELHHVTNTVIAVMGSLVGACILGF------------I 707

  Fly   945 KYLREFRLGYNE--------LPSIPQELAHNMSNLRMLDLS----------NNDLTNVPLMTQAL 991
            .||:.:.:.|..        |.|..:|..:..:|:...|.|          .||.|.|  :.:.|
  Fly   708 IYLKRWHIHYYYSSLKSAALLSSASKESVNKFTNISQRDPSAVYDIFISYCQNDRTWV--LNELL 770

  Fly   992 PHLRRLMLSGNPITSLNNNSFD-GVNEDLEMLD--ISNFRLHYFEYGCLD---SLPHLRSLKLTA 1050
            |::..   :|:....|:...|. ||.    :||  ||          |:|   ||..:.|.|. .
  Fly   771 PNVEE---TGDVSICLHERDFQIGVT----ILDNIIS----------CMDRSYSLMLIISSKF-L 817

  Fly  1051 YSHLEHFNIPHLLRH 1065
            .||...|.: :|.:|
  Fly   818 LSHWCQFEM-YLAQH 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 LRR <84..320 CDD:443914 15/63 (24%)
leucine-rich repeat 84..103 CDD:275380
leucine-rich repeat 104..128 CDD:275380
leucine-rich repeat 129..152 CDD:275380
leucine-rich repeat 153..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
leucine-rich repeat 202..226 CDD:275380
leucine-rich repeat 227..250 CDD:275380
leucine-rich repeat 251..279 CDD:275380 9/22 (41%)
leucine-rich repeat 280..326 CDD:275380 8/47 (17%)
leucine-rich repeat 327..348 CDD:275380 4/21 (19%)
leucine-rich repeat 352..375 CDD:275380 7/22 (32%)
PPP1R42 355..564 CDD:455733 52/229 (23%)
leucine-rich repeat 376..401 CDD:275380 5/26 (19%)
leucine-rich repeat 426..450 CDD:275378 5/31 (16%)
leucine-rich repeat 451..474 CDD:275380 7/22 (32%)
LRR_8 473..559 CDD:404697 15/85 (18%)
leucine-rich repeat 475..524 CDD:275380 10/48 (21%)
leucine-rich repeat 500..519 CDD:275380 0/18 (0%)
leucine-rich repeat 525..548 CDD:275380 5/22 (23%)
LRR <540..>834 CDD:443914 75/307 (24%)
leucine-rich repeat 549..574 CDD:275380 1/24 (4%)
leucine-rich repeat 575..598 CDD:275380 6/22 (27%)
leucine-rich repeat 599..622 CDD:275380 7/23 (30%)
leucine-rich repeat 623..646 CDD:275380 7/22 (32%)
leucine-rich repeat 647..730 CDD:275380 25/85 (29%)
leucine-rich repeat 648..673 CDD:275380 10/27 (37%)
leucine-rich repeat 674..705 CDD:275380 5/30 (17%)
LRR <730..1081 CDD:443914 87/412 (21%)
leucine-rich repeat 731..754 CDD:275380 8/22 (36%)
leucine-rich repeat 755..778 CDD:275380 7/22 (32%)
leucine-rich repeat 779..802 CDD:275380 5/32 (16%)
leucine-rich repeat 803..823 CDD:275380 3/19 (16%)
leucine-rich repeat 852..876 CDD:275380 8/44 (18%)
leucine-rich repeat 877..900 CDD:275380 7/30 (23%)
leucine-rich repeat 901..925 CDD:275380 3/23 (13%)
leucine-rich repeat 926..946 CDD:275380 3/22 (14%)
leucine-rich repeat 947..970 CDD:275380 5/30 (17%)
leucine-rich repeat 971..993 CDD:275380 7/31 (23%)
leucine-rich repeat 994..1014 CDD:275380 3/20 (15%)
leucine-rich repeat 1019..1042 CDD:275380 8/27 (30%)
Toll-9NP_649214.1 LRR 198..537 CDD:443914 106/410 (26%)
leucine-rich repeat 264..287 CDD:275380 7/22 (32%)
leucine-rich repeat 288..311 CDD:275380 9/42 (21%)
leucine-rich repeat 312..356 CDD:275380 13/78 (17%)
leucine-rich repeat 357..381 CDD:275380 7/23 (30%)
leucine-rich repeat 382..397 CDD:275380 5/14 (36%)
leucine-rich repeat 405..430 CDD:275380 9/24 (38%)
leucine-rich repeat 432..453 CDD:275380 6/33 (18%)
leucine-rich repeat 454..477 CDD:275380 8/23 (35%)
leucine-rich repeat 478..501 CDD:275380 8/22 (36%)
leucine-rich repeat 502..525 CDD:275380 7/22 (32%)
TIR 751..891 CDD:214587 26/102 (25%)
Blue background indicates that the domain is not in the aligned region.

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