Protein Alignment chp and CG42709

DIOPT Version :10

• Sequence 1: NP_001263137.1
• Gene: chp / 43690
• FlyBaseID: FBgn0267435
• Length: 1338
• Species: Drosophila melanogaster
• Sequence 2: NP_648600.1
• Gene: CG42709 / 39453
• FlyBaseID: FBgn0261674
• Length: 458
• Species: Drosophila melanogaster
• Alignment Length: 328
• Identity: 75/328 - (22%)
• Similarity: 137/328 - (41%)
• Gaps: 60/328 - (18%)

  Fly   800 VQGLRIVDFSHNHLRGLPDNLFYNGGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFIST 864
            ::..:.|..::.||..:|.::.....:  :|:|||::.::.....::|:...  |::|::|.||:
  Fly   100 LEDFKFVQCANAHLTHVPLDMPKTAAI--IDLSHNVIAELRPEDFANLSRAV--EINLNHNLISS 160

  Fly   865 IHSMDLSNKFRSLRYLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIKL 929
            | ..|:......|:.|.::.|.|.:||...||...:|.:||||:|...:.:|.||:. :..|::.
  Fly   161 I-DKDVFQGSERLKRLRLANNRLTKIDPDTFAAAKELTLLDLSNNTITQRLDGSFLN-QPDLVEF 223

  Fly   930 GLENISLSTVPEIRLKYLREFRLGYNELPSIPQELAHNMSNLRMLDLSNNDLTNVPLMTQALPHL 994
            ...|.|.:.:||                     :...|||.|.:|.|:.||... .:.|:|...|
  Fly   224 SCVNCSWTELPE---------------------QTFQNMSGLEVLRLNKNDFKQ-QINTKAFSPL 266

  Fly   995 RRLMLSGNPITSLNNNSFDGVNEDLEMLDISNFRLHYFEYGCLD---SLPHLRSLKLTAYSHLEH 1056
            .:::....|  .|...:.:.:...|..:|..:| |:| :..|.:   ..|...||.......|:.
  Fly   267 TKIIKLKLP--ELEQQNIEELCSLLTSIDTISF-LNY-DISCYEFVLGTPFNGSLIYPTEPPLKG 327

  Fly  1057 FNIPHLLRHHYNIRQLWIEAPQP-------------FTRIVKKG--------SG----PTQEMQT 1096
            ...|.::....:..:.....|.|             .|.:||.|        ||    |..|.||
  Fly   328 ITNPPIVASITSTAKPVTATPAPPRSANRNRGKMDNSTELVKAGILSSETSTSGVSVEPPAESQT 392

  Fly  1097 LQL 1099
            .|:
  Fly   393 NQV 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chp	NP_001263137.1	LRR	<84..320	CDD:443914
		leucine-rich repeat	84..103	CDD:275380
		leucine-rich repeat	104..128	CDD:275380
		leucine-rich repeat	129..152	CDD:275380
		leucine-rich repeat	153..177	CDD:275380
		leucine-rich repeat	178..201	CDD:275380
		leucine-rich repeat	202..226	CDD:275380
		leucine-rich repeat	227..250	CDD:275380
		leucine-rich repeat	251..279	CDD:275380
		leucine-rich repeat	280..326	CDD:275380
		leucine-rich repeat	327..348	CDD:275380
		leucine-rich repeat	352..375	CDD:275380
		PPP1R42	355..564	CDD:455733
		leucine-rich repeat	376..401	CDD:275380
		leucine-rich repeat	426..450	CDD:275378
		leucine-rich repeat	451..474	CDD:275380
		LRR_8	473..559	CDD:404697
		leucine-rich repeat	475..524	CDD:275380
		leucine-rich repeat	500..519	CDD:275380
		leucine-rich repeat	525..548	CDD:275380
		LRR	<540..>834	CDD:443914	6/33 (18%)
		leucine-rich repeat	549..574	CDD:275380
		leucine-rich repeat	575..598	CDD:275380
		leucine-rich repeat	599..622	CDD:275380
		leucine-rich repeat	623..646	CDD:275380
		leucine-rich repeat	647..730	CDD:275380
		leucine-rich repeat	648..673	CDD:275380
		leucine-rich repeat	674..705	CDD:275380
		LRR	<730..1081	CDD:443914	64/296 (22%)
		leucine-rich repeat	731..754	CDD:275380
		leucine-rich repeat	755..778	CDD:275380
		leucine-rich repeat	779..802	CDD:275380	0/1 (0%)
		leucine-rich repeat	803..823	CDD:275380	4/19 (21%)
		leucine-rich repeat	852..876	CDD:275380	7/23 (30%)
		leucine-rich repeat	877..900	CDD:275380	8/22 (36%)
		leucine-rich repeat	901..925	CDD:275380	9/23 (39%)
		leucine-rich repeat	926..946	CDD:275380	5/19 (26%)
		leucine-rich repeat	947..970	CDD:275380	2/22 (9%)
		leucine-rich repeat	971..993	CDD:275380	7/21 (33%)
		leucine-rich repeat	994..1014	CDD:275380	3/19 (16%)
		leucine-rich repeat	1019..1042	CDD:275380	6/25 (24%)
CG42709	NP_648600.1	LRR	<127..>300	CDD:443914	51/201 (25%)
		leucine-rich repeat	128..147	CDD:275380	5/18 (28%)
		leucine-rich repeat	148..171	CDD:275380	7/25 (28%)
		leucine-rich repeat	172..195	CDD:275380	8/22 (36%)
		leucine-rich repeat	196..219	CDD:275380	9/23 (39%)
		leucine-rich repeat	220..243	CDD:275380	7/43 (16%)
		leucine-rich repeat	244..268	CDD:275380	8/24 (33%)