DRSC/TRiP Functional Genomics Resources

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Protein Alignment chp and LOC1278321

DIOPT Version :10

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:XP_061518133.1 Gene:LOC1278321 / 1278321 VectorBaseID:AGAMI1_010421 Length:565 Species:Anopheles gambiae


Alignment Length:508 Identity:116/508 - (22%)
Similarity:180/508 - (35%) Gaps:194/508 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 SLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSI 588
            |||.|...||.|.:: |:|..|...|..|:                          |.:|||.::
Mosquito    80 SLQRLVIKNNKIKTI-DSSMQFYAELTFLD--------------------------LSYNHLFNM 117

  Fly   589 SQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMA 653
            ...||.....|.:|||:.||:..|..:.|:.|..|..|:||||.::.|.:..|..:||||.|::.
Mosquito   118 PPRTFAYQRKLTELHLNHNKVGSITNKTFVGLVALTVLNLRGNFLDELPEGVFAGVPKLEELNLG 182

  Fly   654 FNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISI 718
            .|::...:...|                                 .|:  :.:::|.|..|.||.
Mosquito   183 QNRIAKIDPKAF---------------------------------AGL--TGLRVLYLDDNTISA 212

  Fly   719 IHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVF 783
            :.....:|.. :|..|::|.||.....::.|..:..|..|||                       
Mosquito   213 VPSPALQPLR-ALGELYIGLNSFAAIPKEAFAMLTGLAKLDL----------------------- 253

  Fly   784 FGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDNLFYNGGMEKLDVSHNMMLKIPSSSLSSLA 848
                             :|..:::.|.:..|||.       .:..||:|.|.:.:||::.|:.|.
Mosquito   254 -----------------EGAALLNVSRDSFRGLE-------RLRTLDLSDNRLARIPTAELAVLE 294

  Fly   849 ALTLCELHLSNNFISTIHSMDLSNKF---RSLRYLDISYNY-LLRIDDAVFATMPKLAVLDLSHN 909
            .|.  ||.|..|....|.    .|.|   .:||.||||.:. |.||:...||           ||
Mosquito   295 RLE--ELSLGQNDFEAIP----PNAFAGLNNLRVLDISGSLKLTRIESGAFA-----------HN 342

  Fly   910 RDLKVMDKSFMGLENSLIKLGLENISLSTVPEIRLKYLREFRLGYNELPSIPQELAHNMSNLRML 974
            .:                   ||.|.::                               ||..:.
Mosquito   343 TN-------------------LEEIVIA-------------------------------SNKMLT 357

  Fly   975 DLSNNDLTNVPLMTQALPHLRRLMLSGNPITSLNNNSFDGVN--EDLEMLDIS 1025
            ::.:..|:       .||||||::|..|.:|:|.    ||:.  .||..||:|
Mosquito   358 EVQDGALS-------GLPHLRRVVLKDNALTTLT----DGMLSWNDLVELDLS 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 LRR <84..320 CDD:443914
leucine-rich repeat 84..103 CDD:275380
leucine-rich repeat 104..128 CDD:275380
leucine-rich repeat 129..152 CDD:275380
leucine-rich repeat 153..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
leucine-rich repeat 202..226 CDD:275380
leucine-rich repeat 227..250 CDD:275380
leucine-rich repeat 251..279 CDD:275380
leucine-rich repeat 280..326 CDD:275380
leucine-rich repeat 327..348 CDD:275380
leucine-rich repeat 352..375 CDD:275380
PPP1R42 355..564 CDD:455733 12/39 (31%)
leucine-rich repeat 376..401 CDD:275380
leucine-rich repeat 426..450 CDD:275378
leucine-rich repeat 451..474 CDD:275380
LRR_8 473..559 CDD:404697 12/34 (35%)
leucine-rich repeat 475..524 CDD:275380 116/508 (23%)
leucine-rich repeat 500..519 CDD:275380
leucine-rich repeat 525..548 CDD:275380 9/22 (41%)
LRR <540..>834 CDD:443914 60/293 (20%)
leucine-rich repeat 549..574 CDD:275380 2/24 (8%)
leucine-rich repeat 575..598 CDD:275380 6/22 (27%)
leucine-rich repeat 599..622 CDD:275380 9/22 (41%)
leucine-rich repeat 623..646 CDD:275380 8/22 (36%)
leucine-rich repeat 647..730 CDD:275380 12/82 (15%)
leucine-rich repeat 648..673 CDD:275380 4/24 (17%)
leucine-rich repeat 674..705 CDD:275380 1/30 (3%)
LRR <730..1081 CDD:443914 67/302 (22%)
leucine-rich repeat 731..754 CDD:275380 6/22 (27%)
leucine-rich repeat 755..778 CDD:275380 4/22 (18%)
leucine-rich repeat 779..802 CDD:275380 0/22 (0%)
leucine-rich repeat 803..823 CDD:275380 4/19 (21%)
leucine-rich repeat 852..876 CDD:275380 7/26 (27%)
leucine-rich repeat 877..900 CDD:275380 11/23 (48%)
leucine-rich repeat 901..925 CDD:275380 2/23 (9%)
leucine-rich repeat 926..946 CDD:275380 3/19 (16%)
leucine-rich repeat 947..970 CDD:275380 0/22 (0%)
leucine-rich repeat 971..993 CDD:275380 2/21 (10%)
leucine-rich repeat 994..1014 CDD:275380 7/19 (37%)
leucine-rich repeat 1019..1042 CDD:275380 4/7 (57%)
LOC1278321XP_061518133.1 None
Blue background indicates that the domain is not in the aligned region.

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