DRSC/TRiP Functional Genomics Resources

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Protein Alignment chp and LRRC53

DIOPT Version :10

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:NP_001369209.1 Gene:LRRC53 / 105378803 HGNCID:25255 Length:1247 Species:Homo sapiens


Alignment Length:814 Identity:178/814 - (21%)
Similarity:277/814 - (34%) Gaps:244/814 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   528 LDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHL--TSISQ 590
            |..::.::||:..|:...|.||.||.|..|.||.|.:....|  .:.|..:.|..|.:  :|::.
Human    38 LIITDGYLSSIESTNLSLLFNLALLSLSRNGIEDVQEDALHG--LTMLRTLLLEHNQISSSSLTD 100

  Fly   591 HTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFN 655
            |||..|.:|:.|.|.:|.:..:....|.|...|..|.|.||:|.||.|.||              
Human   101 HTFSKLHSLQVLVLSNNALRTLRGSWFRNTSGLTRLQLDGNQITNLTDSSF-------------- 151

  Fly   656 QLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIH 720
                                                 .|.|.|      :::.||||:|.||.|.
Human   152 -------------------------------------GGTNLH------SLRYLDLSNNFISYIG 173

  Fly   721 PGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFG 785
            ...|||                         :|.||.:|||.|.:..:. |.|...|||.|:...
Human   174 KDAFRP-------------------------LPQLQEVDLSRNRLAHMP-DVFTPLKQLILLSLD 212

  Fly   786 HNYLSDIPQDIFKPVQGLR-IVDFSHNHLRGLPDNLFYNGGMEKLDVSHNMMLKIPSSSLSSLAA 849
            .|..| ...|:....:.|| .:..|.:.||...|                  |....|:.:..||
Human   213 KNQWS-CTCDLHPLARFLRNYIKSSAHTLRNAKD------------------LNCQPSTAAVAAA 258

  Fly   850 LTLCELHLSN------NFISTIHSMDLSNKFRSLRYLDISYNYLLRIDDAVFATMPKLAVLDLSH 908
            .::..|..:|      ||     ::.|.::...|...|::...:|....||..|...|.|.:.  
Human   259 QSVLRLSETNCDSKAPNF-----TLVLKDRSPLLPGPDVALLTVLGFAGAVGLTCLGLVVFNW-- 316

  Fly   909 NRDLKVMDKSFMGLENSLIKLGLENISLSTVPEIRLKYLREFRLGYNELPSIPQELAHNMSNLRM 973
                    |...|..|....   ||:...|..|                    ...||...|...
Human   317 --------KLHQGKANEHTS---ENLCCRTFDE--------------------PLCAHEARNYHT 350

  Fly   974 LDLSNNDLT---NVPLMT-----QALPHLRRLMLSGNPITSLNNN-SFDGVNEDLEMLD------ 1023
            ....|..||   .:.:|:     :.:|.|:.   :.:..||.:.: :.||...:|:..|      
Human   351 KGYCNCHLTQENEIKVMSTVGSRKEMPLLQE---NSHQATSASESATLDGSFRNLKKKDRGVGST 412

  Fly  1024 --ISNFRLHYFEYGCLDSLPHLRSLK----LTAYS--------HLEHFNI-PHLLRHHYNIRQLW 1073
              ..:.||.:.|  |.:...::|:..    ||.|:        :||...: |..|:||. ||...
Human   413 LFCQDGRLLHSE--CSEPPGNMRAFNEAGLLTTYNPRKVQKLWNLEPGEVQPQTLQHHI-IRTED 474

  Fly  1074 IEAPQPFTRIVKKGSGPTQEMQTLQLGNPT---DLQREMEGHLPSKLTN-ITFSGPQFTNLNE-- 1132
            |.:.....|.....|....|....:|.|.:   .:::|..|..|.:..: ||.|..:.....|  
Human   475 ISSDIFRRRYATPASALAGESLEKRLTNESWQPPIEKEDNGLHPHRQRHFITSSSSKPCEPEEHY 539

  Fly  1133 --RILRGMRSPY------------LYMQLFNTSLQALPP--NFFKYMGRVRNISLDIRYHNRNLK 1181
              :|::..||.|            .|.|..|:.:....|  .|..||   :....:.|.|::..|
Human   540 VQKIVQKNRSKYDDPCGLLKQSKPRYFQPNNSLICKYVPCEQFEDYM---KEKKPNRRQHSKPEK 601

  Fly  1182 KIPNPNTGAVPYLPN------SVFLTDLKMSHTDLNC---DCDLGWVEF------------WQRK 1225
            :....|:....:|.:      |...|..|.:::....   |.||  ||.            |:|:
Human   602 EQIQINSAIEKFLMSEDNIDLSGLSTKTKKAYSPKRVIFHDPDL--VEINRSMMSPKISTPWKRQ 664

  Fly  1226 RRQYICSSQTWTDTVFRTFMNSPCQVYGRHNCDE 1259
            :.|    |...|....:.|.|:     |..|..|
Human   665 KNQ----SNQLTKLDVKKFSNT-----GERNKGE 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 LRR <84..320 CDD:443914
leucine-rich repeat 84..103 CDD:275380
leucine-rich repeat 104..128 CDD:275380
leucine-rich repeat 129..152 CDD:275380
leucine-rich repeat 153..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
leucine-rich repeat 202..226 CDD:275380
leucine-rich repeat 227..250 CDD:275380
leucine-rich repeat 251..279 CDD:275380
leucine-rich repeat 280..326 CDD:275380
leucine-rich repeat 327..348 CDD:275380
leucine-rich repeat 352..375 CDD:275380
PPP1R42 355..564 CDD:455733 14/35 (40%)
leucine-rich repeat 376..401 CDD:275380
leucine-rich repeat 426..450 CDD:275378
leucine-rich repeat 451..474 CDD:275380
LRR_8 473..559 CDD:404697 11/30 (37%)
leucine-rich repeat 475..524 CDD:275380
leucine-rich repeat 500..519 CDD:275380
leucine-rich repeat 525..548 CDD:275380 5/19 (26%)
LRR <540..>834 CDD:443914 73/296 (25%)
leucine-rich repeat 549..574 CDD:275380 9/24 (38%)
leucine-rich repeat 575..598 CDD:275380 8/24 (33%)
leucine-rich repeat 599..622 CDD:275380 6/22 (27%)
leucine-rich repeat 623..646 CDD:275380 11/22 (50%)
leucine-rich repeat 647..730 CDD:275380 14/82 (17%)
leucine-rich repeat 648..673 CDD:275380 0/24 (0%)
leucine-rich repeat 674..705 CDD:275380 3/30 (10%)
LRR <730..1081 CDD:443914 78/387 (20%)
leucine-rich repeat 731..754 CDD:275380 0/22 (0%)
leucine-rich repeat 755..778 CDD:275380 8/22 (36%)
leucine-rich repeat 779..802 CDD:275380 5/22 (23%)
leucine-rich repeat 803..823 CDD:275380 6/20 (30%)
leucine-rich repeat 852..876 CDD:275380 5/29 (17%)
leucine-rich repeat 877..900 CDD:275380 6/22 (27%)
leucine-rich repeat 901..925 CDD:275380 4/23 (17%)
leucine-rich repeat 926..946 CDD:275380 4/19 (21%)
leucine-rich repeat 947..970 CDD:275380 2/22 (9%)
leucine-rich repeat 971..993 CDD:275380 4/29 (14%)
leucine-rich repeat 994..1014 CDD:275380 3/20 (15%)
leucine-rich repeat 1019..1042 CDD:275380 6/30 (20%)
LRRC53NP_001369209.1 LRR 1 34..55 4/16 (25%)
LRR 2 58..79 9/20 (45%)
LRR <75..>215 CDD:443914 53/224 (24%)
LRR 3 82..102 4/19 (21%)
leucine-rich repeat 83..108 CDD:275380 8/24 (33%)
LRR 4 108..129 5/20 (25%)
leucine-rich repeat 109..132 CDD:275380 6/22 (27%)
LRR 5 132..153 11/71 (15%)
leucine-rich repeat 133..158 CDD:275380 14/81 (17%)
LRR 6 158..179 9/20 (45%)
leucine-rich repeat 159..182 CDD:275380 11/47 (23%)
LRR 7 182..203 8/21 (38%)
leucine-rich repeat 183..205 CDD:275380 8/22 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 828..866
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 887..927
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1223..1247
Blue background indicates that the domain is not in the aligned region.

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