Protein Alignment chp and lrrtm2

DIOPT Version :10

• Sequence 1: NP_001263137.1
• Gene: chp / 43690
• FlyBaseID: FBgn0267435
• Length: 1338
• Species: Drosophila melanogaster
• Sequence 2: NP_001338621.1
• Gene: lrrtm2 / 100538061
• ZFINID: ZDB-GENE-080327-8
• Length: 542
• Species: Danio rerio
• Alignment Length: 354
• Identity: 98/354 - (27%)
• Similarity: 152/354 - (42%)
• Gaps: 57/354 - (16%)

  Fly   439 VGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDFSENGISSIENDAFHEIGHSLISL 503
            :.|.|..|.|.  ..|.:...|:|.:.|..|.....|..|....|.|:::..|||..: :.|..|
Zfish    53 LAPPDGVDKGA--LGLSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGL-YKLKDL 114

  Fly   504 KMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQ 568
            .:|.... :.||.....||.:||.||.|.|.::::....||.|:.|::|.|..|.:.......|
Zfish   115 NLSSNRI-TKLPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAF- 177

  Fly   569 GDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKI 633
            .|..| ||.:.|..|.|.|::::.|..|..||:|||:.|.:.||....|..|..|::|.|:.|||
Zfish   178 WDCRS-LEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNKI 241

  Fly   634 NNLAD------------------------ESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNL 674
            |||..                        |.|:.||.|:||.:..|:|.|.:....|...:|:.:
Zfish   242 NNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLSNLDSQTMDMWKSLNVI 306

  Fly   675 NVNVSHNQIRQLMYN-----SSWSGRNEHGGM-----YHSNIKILD------LSHNNISIIHPGY 723
            .::.:..:..:.:.|     |::.||.||..:     |....:|||      |..|        :
Zfish   307 GLSSNLWECTKRICNLATWLSTFKGRWEHSILCYSPEYAQGEEILDAVYGFQLCQN--------F 363

  Fly   724 FRPAEISLTHLHLGYNSLMNTTRDVFGNM 752
            ..|..::.|....   .|.:.|..:||||
Zfish   364 SAPVVLTSTSTEA---MLPDITSSLFGNM 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chp	NP_001263137.1	LRR	<84..320	CDD:443914
		leucine-rich repeat	84..103	CDD:275380
		leucine-rich repeat	104..128	CDD:275380
		leucine-rich repeat	129..152	CDD:275380
		leucine-rich repeat	153..177	CDD:275380
		leucine-rich repeat	178..201	CDD:275380
		leucine-rich repeat	202..226	CDD:275380
		leucine-rich repeat	227..250	CDD:275380
		leucine-rich repeat	251..279	CDD:275380
		leucine-rich repeat	280..326	CDD:275380
		leucine-rich repeat	327..348	CDD:275380
		leucine-rich repeat	352..375	CDD:275380
		PPP1R42	355..564	CDD:455733	36/124 (29%)
		leucine-rich repeat	376..401	CDD:275380
		leucine-rich repeat	426..450	CDD:275378	4/10 (40%)
		leucine-rich repeat	451..474	CDD:275380	5/22 (23%)
		LRR_8	473..559	CDD:404697	27/85 (32%)
		leucine-rich repeat	475..524	CDD:275380	14/48 (29%)
		leucine-rich repeat	500..519	CDD:275380	5/18 (28%)
		leucine-rich repeat	525..548	CDD:275380	9/22 (41%)
		LRR	<540..>834	CDD:443914	69/253 (27%)
		leucine-rich repeat	549..574	CDD:275380	6/24 (25%)
		leucine-rich repeat	575..598	CDD:275380	8/22 (36%)
		leucine-rich repeat	599..622	CDD:275380	10/22 (45%)
		leucine-rich repeat	623..646	CDD:275380	12/46 (26%)
		leucine-rich repeat	647..730	CDD:275380	21/98 (21%)
		leucine-rich repeat	648..673	CDD:275380	7/24 (29%)
		leucine-rich repeat	674..705	CDD:275380	7/40 (18%)
		LRR	<730..1081	CDD:443914	7/23 (30%)
		leucine-rich repeat	731..754	CDD:275380	7/22 (32%)
		leucine-rich repeat	755..778	CDD:275380
		leucine-rich repeat	779..802	CDD:275380
		leucine-rich repeat	803..823	CDD:275380
		leucine-rich repeat	852..876	CDD:275380
		leucine-rich repeat	877..900	CDD:275380
		leucine-rich repeat	901..925	CDD:275380
		leucine-rich repeat	926..946	CDD:275380
		leucine-rich repeat	947..970	CDD:275380
		leucine-rich repeat	971..993	CDD:275380
		leucine-rich repeat	994..1014	CDD:275380
		leucine-rich repeat	1019..1042	CDD:275380
lrrtm2	NP_001338621.1	LRRNT	34..>59	CDD:214470	2/5 (40%)
		LRR	<66..349	CDD:443914	81/286 (28%)
		leucine-rich repeat	66..86	CDD:275380	5/19 (26%)
		leucine-rich repeat	87..110	CDD:275380	7/23 (30%)
		leucine-rich repeat	111..134	CDD:275380	7/23 (30%)
		leucine-rich repeat	135..158	CDD:275380	9/22 (41%)
		leucine-rich repeat	159..182	CDD:275380	6/23 (26%)
		leucine-rich repeat	183..206	CDD:275380	8/22 (36%)
		leucine-rich repeat	207..230	CDD:275380	10/22 (45%)
		leucine-rich repeat	231..254	CDD:275380	9/22 (41%)
		leucine-rich repeat	255..278	CDD:275380	3/22 (14%)