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Protein Alignment stops and Asb17

DIOPT Version :9

Sequence 1:	NP_733416.2	Gene:	stops / 43683	FlyBaseID:	FBgn0086704	Length:	521	Species:	Drosophila melanogaster
Sequence 2:	NP_080034.2	Gene:	Asb17 / 66772	MGIID:	1914022	Length:	295	Species:	Mus musculus

Alignment Length:	309	Identity:	64/309 - (20%)
Similarity:	119/309 - (38%)	Gaps:	106/309 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly   125 TDEVAAIAVTAAMRYHRMAKEQN---GQVCLMGKYHNILYIGLRTCWDWGVRDSEVVVKLLVAIY 186
            ||.:|.:..:.    ||.....|   .::|:    :.|||      |.:..:.:...|:||:
Mouse    68 TDYIAFVEKSG----HRFELNFNLEFTEICV----NTILY------WVFARKGNPDFVELLL--- 115

  Fly   187 ECEKTYERIFLGALFGPHAPHFIAGWRSDFQDQHENVRAMVYFLKHATREQLTLPVWIPRFEQER 251
              :||.:.:                     ||:..:: |:::        :...||:.|.
Mouse   116 --KKTKDYV---------------------QDRSCSL-ALIW--------RTFTPVYCPS----- 143

  Fly   252 QLRFIDVPIESCGKSSPLRIALQANAPELLLILLRYGAAPQPPDGGASVIIALL----------D 306
                   |:...   :||....|.....:|.|||:||...:..:....|:..||          .
Mouse   144 -------PLSGI---TPLLYVAQTRQSNILKILLQYGILEREKNPINIVLTILLYPSRVRIMVDH 198

  Fly   307 KLIEDGRNYSFELVMCLKIL----LRNV-VMIEMPFKPLLYAARREMFFD-----RYGRLLMDKI 361
            :||:...:....|::|.::|    :|.: ..:.:..:|::     :.:.|     ||
Mouse   199 ELIDIQEDAKTCLMLCSRVLSTISVREIETQLSLGRRPII-----QNWLDYIPPTRY-------- 250

  Fly   362 IGKEQVYGVPSLRHLCRCCIRDVMRMHNQLPSGIDTLRLPKRLQRYIDL 410
              |:..    .|.||||..||..:..:|.||:||.:|.:|.|||.:::|
Mouse   251 --KDPC----ELVHLCRITIRTQLLANNMLPNGIFSLLIPTRLQNFLNL 293

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
stops	NP_733416.2	SOCS_box	369..408	CDD:462192	17/38 (45%)
Asb17	NP_080034.2	ANK	146..176		9/32 (28%)
Asb17	NP_080034.2	SOCS_ASB_like	251..294	CDD:239686	19/47 (40%)

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.